RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 TRMT2AQ8IZ69 625 aaKnown RBP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 PPP1R1BQ9UD71 204 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 ADGBQ8N7X0 1667 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 ARID4AP29374 1257 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 SNCBQ16143 134 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 AKNAD1Q5T1N1 836 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 PHLPP2Q6ZVD8 1323 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 CALUO43852 315 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 KRT5P13647 590 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 ERCC3P19447 782 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 MORC3Q14149 939 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 TRIM58Q8NG06 486 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 PARP1P09874 1014 aaKnown RBP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 CCDC38Q502W7 563 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 MICAL1Q8TDZ2 1067 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 XAGE2Q96GT9 111 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 IRS4O14654 1257 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-205ENST00000399050 GOLGA8FQ08AF8 430 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 GOLGA8DPQ0D2H9 430 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 SYCE1Q8N0S2 351 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 PCDHA7Q9UN72 937 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 KDM5CP41229 1560 aa9.61□□□□□ -0.87
CTNND1-205ENST00000399050 PLCH2O75038 1416 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 C2CD5Q86YS7 1000 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 RAB3IPQ96QF0 476 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 METTL22Q9BUU2 404 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 CLIC4Q9Y696 253 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 SPATA31E1Q6ZUB1 1445 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 FRMD3A2A2Y4 597 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 EXOC5O00471 708 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 ERCC5P28715 1186 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 SLC8A1P32418 973 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 KLHL30Q0D2K2 578 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 TRIM68Q6AZZ1 485 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 RPAINQ86UA6 219 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 EFCAB13Q8IY85 973 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 OR8K1Q8NGG5 319 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 DSCC1Q9BVC3 393 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 IMPG2Q9BZV3 1241 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 CSRNP2Q9H175 543 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 HYOU1Q9Y4L1 999 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 DENND4BO75064 1496 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 EYA2O00167 538 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 HOXC9P31274 260 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 TPD52P55327 224 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 LONRF2Q1L5Z9 754 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 HHATQ5VTY9 493 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 C11orf57Q6ZUT1 292 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 PEX26Q7Z412 305 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 TXNDC16Q9P2K2 825 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 BICRAQ9NZM4 1560 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 PFKFB2O60825 505 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 CMA1P23946 247 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 LRCH2Q5VUJ6 765 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 ZNF274Q96GC6 653 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 DDX23Q9BUQ8 820 aaKnown RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 FAM207AQ9NSI2 230 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 FAN1Q9Y2M0 1017 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 A0A0D9SFI3 127 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 SEPT14Q6ZU15 432 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 ZNF365Q70YC5 407 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 KIFAP3Q92845 792 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 ASIC3Q9UHC3 531 aa9.6□□□□□ -0.87
CTNND1-205ENST00000399050 NSFL1CQ9UNZ2 370 aaKnown RBP9.6□□□□□ -0.87
CTNND1-205ENST00000399050 RGS16O15492 202 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-205ENST00000399050 TXKP42681 527 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 CLCN6P51797 869 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 MAK16Q9BXY0 300 aaKnown RBP9.59□□□□□ -0.87
CTNND1-205ENST00000399050 KDM5DQ9BY66 1539 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 DYMQ7RTS9 669 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 ANKRD42Q8N9B4 389 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-205ENST00000399050 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 RAB17Q9H0T7 212 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 AGTPBP1Q9UPW5 1226 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 TRPM2O94759 1503 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 STX10O60499 249 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 MUM1Q2TAK8 710 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.59□□□□□ -0.876e-14■□□□□ 9.9
CTNND1-205ENST00000399050 LSG1Q9H089 658 aaKnown RBP9.59□□□□□ -0.87
CTNND1-205ENST00000399050 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 CDC23Q9UJX2 597 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 PLXNC1O60486 1568 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 CETN3O15182 167 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 DPH6Q7L8W6 267 aa9.59□□□□□ -0.87
CTNND1-205ENST00000399050 ARHGAP24Q8N264 748 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms