RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
CXCL12-205ENST00000395794 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
CXCL12-205ENST00000395794 EHD4Q9H223 541 aa16.61■□□□□ 0.25
CXCL12-205ENST00000395794 DNAJC18Q9H819 358 aa16.61■□□□□ 0.25
CXCL12-205ENST00000395794 ADGRA2Q96PE1 1338 aa16.61■□□□□ 0.25
CXCL12-205ENST00000395794 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 BCRP11274 1271 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 BACE1P56817 501 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 MTMR2Q13614 643 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 TREML2Q5T2D2 321 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 RAET1EQ8TD07 263 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 TRIM47Q96LD4 638 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 MCM9Q9NXL9 1143 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 ZBTB47Q9UFB7 747 aaPredicted RBP16.6■□□□□ 0.25
CXCL12-205ENST00000395794 SRRDQ9UH36 339 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 ZBTB21Q9ULJ3 1066 aa16.6■□□□□ 0.25
CXCL12-205ENST00000395794 TCRBV5S4A2TA0A5A2 114 aa16.59■□□□□ 0.25
CXCL12-205ENST00000395794 USP17L10C9JJH3 530 aa16.59■□□□□ 0.25
CXCL12-205ENST00000395794 ADD2P35612 726 aa16.59■□□□□ 0.25
CXCL12-205ENST00000395794 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
CXCL12-205ENST00000395794 SH3D19Q5HYK7 790 aa16.59■□□□□ 0.25
CXCL12-205ENST00000395794 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
CXCL12-205ENST00000395794 AMOTL1Q8IY63 956 aa16.59■□□□□ 0.25
CXCL12-205ENST00000395794 CABP5Q9NP86 173 aa16.59■□□□□ 0.25
CXCL12-205ENST00000395794 GH2P01242 217 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
CXCL12-205ENST00000395794 IRX3P78415 501 aaPredicted RBP16.58■□□□□ 0.24
CXCL12-205ENST00000395794 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 LCORLQ8N3X6 602 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 ANKRD13CQ8N6S4 541 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 FEZ1Q99689 392 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 ARMT1Q9H993 441 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 MYPNQ86TC9 1320 aa16.58■□□□□ 0.24
CXCL12-205ENST00000395794 MYO5AQ9Y4I1 1855 aaKnown RBP16.58■□□□□ 0.24
CXCL12-205ENST00000395794 TNPO2O14787 897 aaKnown RBP16.57■□□□□ 0.24
CXCL12-205ENST00000395794 MBD4O95243 580 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 PLCD1P51178 756 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 JAG1P78504 1218 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 RAB3GAP1Q15042 981 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 SDR42E1Q8WUS8 393 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 ATP8A2Q9NTI2 1148 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 PCDHB15Q9Y5E8 787 aa16.57■□□□□ 0.24
CXCL12-205ENST00000395794 CTGFP29279 349 aa16.56■□□□□ 0.24
CXCL12-205ENST00000395794 LRRFIP1Q32MZ4 808 aaKnown RBP16.56■□□□□ 0.24
CXCL12-205ENST00000395794 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
CXCL12-205ENST00000395794 SH3TC2Q8TF17 1288 aa16.56■□□□□ 0.24
CXCL12-205ENST00000395794 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-205ENST00000395794 DCP1AQ9NPI6 582 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-205ENST00000395794 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-205ENST00000395794 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
CXCL12-205ENST00000395794 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
CXCL12-205ENST00000395794 ERC2O15083 957 aa16.55■□□□□ 0.24
CXCL12-205ENST00000395794 MYCP01106 439 aaPredicted RBP16.55■□□□□ 0.24
CXCL12-205ENST00000395794 GRK4P32298 578 aa16.55■□□□□ 0.24
CXCL12-205ENST00000395794 USP14P54578 494 aa16.55■□□□□ 0.24
CXCL12-205ENST00000395794 FAM110CQ1W6H9 321 aa16.55■□□□□ 0.24
CXCL12-205ENST00000395794 COA7Q96BR5 231 aa16.55■□□□□ 0.24
CXCL12-205ENST00000395794 CRBNQ96SW2 442 aa16.55■□□□□ 0.24
CXCL12-205ENST00000395794 SWAP70Q9UH65 585 aa16.55■□□□□ 0.24
CXCL12-205ENST00000395794 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
CXCL12-205ENST00000395794 POTEFA5A3E0 1075 aa16.54■□□□□ 0.24
CXCL12-205ENST00000395794 MPHOSPH10O00566 681 aaKnown RBP16.54■□□□□ 0.24
CXCL12-205ENST00000395794 HOXA7P31268 230 aaPredicted RBP16.54■□□□□ 0.24
CXCL12-205ENST00000395794 PRKCZQ05513 592 aa16.54■□□□□ 0.24
CXCL12-205ENST00000395794 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
CXCL12-205ENST00000395794 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
CXCL12-205ENST00000395794 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
CXCL12-205ENST00000395794 TTC41PQ6P2S7 1318 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 PRKAB2O43741 272 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 ZFYP08048 801 aaPredicted RBP16.53■□□□□ 0.24
CXCL12-205ENST00000395794 SHMT1P34896 483 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 UBXN2AP68543 259 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 ZYXQ15942 572 aaKnown RBP16.53■□□□□ 0.24
CXCL12-205ENST00000395794 SLFNL1Q499Z3 407 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 ATAD5Q96QE3 1844 aa16.53■□□□□ 0.24
CXCL12-205ENST00000395794 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
CXCL12-205ENST00000395794 FLT3LGP49771 235 aa16.52■□□□□ 0.24
CXCL12-205ENST00000395794 GABPAQ06546 454 aa16.52■□□□□ 0.24
CXCL12-205ENST00000395794 AAMPQ13685 434 aa16.52■□□□□ 0.24
CXCL12-205ENST00000395794 TSHZ3Q63HK5 1081 aa16.52■□□□□ 0.24
CXCL12-205ENST00000395794 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.24
CXCL12-205ENST00000395794 GTF3C2Q8WUA4 911 aaPredicted RBP16.52■□□□□ 0.24
CXCL12-205ENST00000395794 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.24
CXCL12-205ENST00000395794 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.24
CXCL12-205ENST00000395794 MYH1P12882 1939 aa16.52■□□□□ 0.23
CXCL12-205ENST00000395794 ADCY3O60266 1144 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
CXCL12-205ENST00000395794 CYP2D6P10635 497 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 HERVK_113P62684 666 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 PUS7LQ9H0K6 701 aaKnown RBP16.51■□□□□ 0.23
CXCL12-205ENST00000395794 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 HTTP42858 3142 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms