RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 C12orf60Q5U649 245 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 ANKRD18AQ8IVF6 992 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 DNAJC25Q9H1X3 360 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 POLR3EQ9NVU0 708 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 IGKV6D-41A0A0C4DH26 115 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 FMNL1O95466 1100 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 RASA1P20936 1047 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 CYP7A1P22680 504 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 KRT32Q14532 448 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 TMEM139Q8IV31 216 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 MPHOSPH8Q99549 860 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 ATP1A3P13637 1013 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 IFNAR1P17181 557 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 FMR1Q06787 632 aaKnown RBP eCLIP9.9□□□□□ -0.823e-7■□□□□ 11.2
GAPVD1-204ENST00000394083 NAALADL2Q58DX5 795 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 CHMP4CQ96CF2 233 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 CD209Q9NNX6 404 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 SERPINB2P05120 415 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 ANO6Q4KMQ2 910 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 SMARCC1Q92922 1105 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 ABCF2Q9UG63 623 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 HDAC5Q9UQL6 1122 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 EGFRP00533 1210 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 MMP1P03956 469 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 SARSP49591 514 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 NBPF5PQ86XG9 351 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 BRIP1Q9BX63 1249 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 BCAS3Q9H6U6 928 aa9.9□□□□□ -0.82
GAPVD1-204ENST00000394083 TRIOO75962 3097 aa9.9□□□□□ -0.83
GAPVD1-204ENST00000394083 NCLP19338 710 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 SF3A1Q15459 793 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 E2F4Q16254 413 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 IMMTQ16891 758 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 ZNF654Q8IZM8 581 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 LRRN4CLQ8ND94 238 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 SETDB2Q96T68 719 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 RTCBQ9Y3I0 505 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 ACTN4O43707 911 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 APOBEC3HQ6NTF7 200 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 CAMKK2Q96RR4 588 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 OPLAHO14841 1288 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 PFKFB1P16118 471 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 RNF20Q5VTR2 975 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 ORC3Q9UBD5 711 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 FLT1P17948 1338 aa9.89□□□□□ -0.83
GAPVD1-204ENST00000394083 ADCY5O95622 1261 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 KCNJ4P48050 445 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 VPS54Q9P1Q0 977 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 ARID2Q68CP9 1835 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 ZNF500O60304 480 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 ABL1P00519 1130 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 UQCRFS1P1P0C7P4 283 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 SLC39A14Q15043 492 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 ANKRD1Q15327 319 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 MSL1Q68DK7 614 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 EPSTI1Q96J88 318 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 SPATA32Q96LK8 384 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 TUBE1Q9UJT0 475 aa9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 CACTINQ8WUQ7 758 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-204ENST00000394083 TAF7LQ5H9L4 462 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 SH3RF1Q7Z6J0 888 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 AIDAQ96BJ3 306 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 CFAP54Q96N23 3096 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 STK36Q9NRP7 1315 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 GPR75-ASB3A0A0A6YYF3 556 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 COBLO75128 1261 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 HMGB1P09429 215 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 RESP18Q5W5W9 173 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 KRT27Q7Z3Y8 459 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 RASGRP4Q8TDF6 673 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 TMEM60Q9H2L4 133 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 SCAF8Q9UPN6 1271 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 XDHP47989 1333 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 CDC25AP30304 524 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 GOLGA8FQ08AF8 430 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 GOLGA8DPQ0D2H9 430 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 GJA10Q969M2 543 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 FAM196BA6NMK8 535 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 ORC4O43929 436 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 CHRNA5P30532 468 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 HIBADHP31937 336 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 CCZ1BP86790 482 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 CCZ1P86791 482 aaPredicted RBP9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 TTF1Q15361 905 aaPredicted RBP9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 SBK1Q52WX2 424 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 ADALQ6DHV7 355 aa9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 ZSCAN10Q96SZ4 725 aaPredicted RBP9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 TRPC5Q9UL62 973 aaPredicted RBP9.87□□□□□ -0.83
GAPVD1-204ENST00000394083 MBD3O95983 291 aa9.86□□□□□ -0.83
GAPVD1-204ENST00000394083 PPP4CP60510 307 aa9.86□□□□□ -0.83
GAPVD1-204ENST00000394083 PNOCQ13519 176 aa9.86□□□□□ -0.83
GAPVD1-204ENST00000394083 TRAPPC3LQ5T215 181 aa9.86□□□□□ -0.83
GAPVD1-204ENST00000394083 DAGLAQ9Y4D2 1042 aa9.86□□□□□ -0.83
GAPVD1-204ENST00000394083 MAGEB6P1A0A0J9YX57 407 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms