RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 RTN1Q16799 776 aa24.92■■□□□ 1.58
TRIM54-202ENST00000380075 TRIM22Q8IYM9 498 aa24.92■■□□□ 1.58
TRIM54-202ENST00000380075 PHKBQ93100 1093 aa24.92■■□□□ 1.58
TRIM54-202ENST00000380075 PODXL2Q9NZ53 605 aa24.92■■□□□ 1.58
TRIM54-202ENST00000380075 POLLQ9UGP5 575 aa24.92■■□□□ 1.58
TRIM54-202ENST00000380075 XDHP47989 1333 aa24.92■■□□□ 1.58
TRIM54-202ENST00000380075 PPP6R2O75170 966 aa24.91■■□□□ 1.58
TRIM54-202ENST00000380075 GNL2Q13823 731 aaKnown RBP24.91■■□□□ 1.58
TRIM54-202ENST00000380075 GRIPAP1Q4V328 841 aa24.91■■□□□ 1.58
TRIM54-202ENST00000380075 UBAC1Q9BSL1 405 aa24.91■■□□□ 1.58
TRIM54-202ENST00000380075 GJB4Q9NTQ9 266 aa24.91■■□□□ 1.58
TRIM54-202ENST00000380075 LRRC37AA6NMS7 1700 aa24.91■■□□□ 1.58
TRIM54-202ENST00000380075 CMA1P23946 247 aa24.91■■□□□ 1.58
TRIM54-202ENST00000380075 DCAF8L1A6NGE4 600 aa24.9■■□□□ 1.58
TRIM54-202ENST00000380075 CCDC144CPQ8IYA2 1237 aa24.9■■□□□ 1.58
TRIM54-202ENST00000380075 TBC1D16Q8TBP0 767 aa24.9■■□□□ 1.58
TRIM54-202ENST00000380075 PIBF1Q8WXW3 757 aa24.9■■□□□ 1.58
TRIM54-202ENST00000380075 MYL10Q9BUA6 226 aa24.9■■□□□ 1.58
TRIM54-202ENST00000380075 SLC26A6Q9BXS9 759 aa24.9■■□□□ 1.58
TRIM54-202ENST00000380075 TAOK3Q9H2K8 898 aa24.9■■□□□ 1.58
TRIM54-202ENST00000380075 HIBADHP31937 336 aaKnown RBP24.89■■□□□ 1.58
TRIM54-202ENST00000380075 AIFM3Q96NN9 605 aa24.89■■□□□ 1.58
TRIM54-202ENST00000380075 GPR101Q96P66 508 aaPredicted RBP24.89■■□□□ 1.58
TRIM54-202ENST00000380075 PSMD1Q99460 953 aa24.89■■□□□ 1.58
TRIM54-202ENST00000380075 GGA1Q9UJY5 639 aa24.89■■□□□ 1.58
TRIM54-202ENST00000380075 ECM29Q5VYK3 1845 aa24.89■■□□□ 1.57
TRIM54-202ENST00000380075 GOLGA6L19H0YKK7 550 aa24.89■■□□□ 1.57
TRIM54-202ENST00000380075 C6orf229H3BNL8 230 aa24.89■■□□□ 1.57
TRIM54-202ENST00000380075 UFL1O94874 794 aa24.89■■□□□ 1.57
TRIM54-202ENST00000380075 TPM2P07951 284 aa24.89■■□□□ 1.57
TRIM54-202ENST00000380075 SDR42E1Q8WUS8 393 aa24.89■■□□□ 1.57
TRIM54-202ENST00000380075 SDF4Q9BRK5 362 aa24.89■■□□□ 1.57
TRIM54-202ENST00000380075 RTFDC1Q9BY42 306 aaPredicted RBP24.89■■□□□ 1.57
TRIM54-202ENST00000380075 ZNF277Q9NRM2 450 aaPredicted RBP24.89■■□□□ 1.57
TRIM54-202ENST00000380075 PRELPP51888 382 aa24.88■■□□□ 1.57
TRIM54-202ENST00000380075 NDUFA8P51970 172 aa24.88■■□□□ 1.57
TRIM54-202ENST00000380075 IQCB1Q15051 598 aa24.88■■□□□ 1.57
TRIM54-202ENST00000380075 SAFBQ15424 915 aaKnown RBP eCLIP24.88■■□□□ 1.57
TRIM54-202ENST00000380075 AXDND1Q5T1B0 1012 aaPredicted RBP24.88■■□□□ 1.57
TRIM54-202ENST00000380075 SARM1Q6SZW1 724 aa24.88■■□□□ 1.57
TRIM54-202ENST00000380075 PLA2G4DQ86XP0 818 aa24.88■■□□□ 1.57
TRIM54-202ENST00000380075 NAT10Q9H0A0 1025 aaKnown RBP24.88■■□□□ 1.57
TRIM54-202ENST00000380075 A0A1B0GVL5 298 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 MINDY4BA8MYZ0 360 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 DEXIO95424 95 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 FGRP09769 529 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 ZNF654Q8IZM8 581 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.87■■□□□ 1.57
TRIM54-202ENST00000380075 ATP2B4P23634 1241 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 SEC23AQ15436 765 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 CEP57L1Q8IYX8 460 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 NSUN4Q96CB9 384 aaKnown RBP24.87■■□□□ 1.57
TRIM54-202ENST00000380075 TIGD1Q96MW7 591 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 DUOX1Q9NRD9 1551 aa24.87■■□□□ 1.57
TRIM54-202ENST00000380075 CDC25BP30305 580 aa24.86■■□□□ 1.57
TRIM54-202ENST00000380075 ZNF75DP51815 510 aa24.86■■□□□ 1.57
TRIM54-202ENST00000380075 FANCBQ8NB91 859 aa24.86■■□□□ 1.57
TRIM54-202ENST00000380075 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.86■■□□□ 1.57
TRIM54-202ENST00000380075 LEMD3Q9Y2U8 911 aa24.86■■□□□ 1.57
TRIM54-202ENST00000380075 LTBP3Q9NS15 1303 aa24.86■■□□□ 1.57
TRIM54-202ENST00000380075 MAST2Q6P0Q8 1798 aa24.86■■□□□ 1.57
TRIM54-202ENST00000380075 CRACR2BQ8N4Y2 399 aaPredicted RBP24.85■■□□□ 1.57
TRIM54-202ENST00000380075 TRIM5Q9C035 493 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 TTC12Q9H892 705 aaPredicted RBP24.85■■□□□ 1.57
TRIM54-202ENST00000380075 FER1L6Q2WGJ9 1857 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 TNKSO95271 1327 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 MMP1P03956 469 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 PTPAQ15257 358 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 NBPF11Q86T75 865 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 SUPT20HQ8NEM7 779 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 ZKSCAN3Q9BRR0 538 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 FOXP1Q9H334 677 aaPredicted RBP24.85■■□□□ 1.57
TRIM54-202ENST00000380075 KIAA1468Q9P260 1216 aa24.85■■□□□ 1.57
TRIM54-202ENST00000380075 FAM237AA0A1B0GTK4 181 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 NT5C2P49902 561 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 SPTY2D1Q68D10 685 aaPredicted RBP24.84■■□□□ 1.57
TRIM54-202ENST00000380075 C11orf57Q6ZUT1 292 aaPredicted RBP24.84■■□□□ 1.57
TRIM54-202ENST00000380075 MAP3K14Q99558 947 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 CRNKL1Q9BZJ0 848 aaKnown RBP24.84■■□□□ 1.57
TRIM54-202ENST00000380075 ATP8A2Q9NTI2 1148 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.84■■□□□ 1.57
TRIM54-202ENST00000380075 LTBP1Q14766 1721 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 RIMBP2O15034 1052 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 ZNF202O95125 648 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 KLRK1P26718 216 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 DYNLL1P63167 89 aaKnown RBP24.84■■□□□ 1.57
TRIM54-202ENST00000380075 ZRSR1Q15695 479 aaKnown RBP24.84■■□□□ 1.57
TRIM54-202ENST00000380075 IQCA1Q86XH1 822 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 NOSTRINQ8IVI9 506 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 ZNF384Q8TF68 577 aa24.84■■□□□ 1.57
TRIM54-202ENST00000380075 RNF26Q9BY78 433 aaPredicted RBP24.84■■□□□ 1.57
TRIM54-202ENST00000380075 MYH13Q9UKX3 1938 aa24.83■■□□□ 1.57
TRIM54-202ENST00000380075 BECN2A8MW95 431 aa24.83■■□□□ 1.57
TRIM54-202ENST00000380075 PFKFB1P16118 471 aa24.83■■□□□ 1.57
TRIM54-202ENST00000380075 MECOMQ03112 1051 aa24.83■■□□□ 1.57
TRIM54-202ENST00000380075 AOC3Q16853 763 aa24.83■■□□□ 1.57
TRIM54-202ENST00000380075 ZSCAN10Q96SZ4 725 aaPredicted RBP24.83■■□□□ 1.57
TRIM54-202ENST00000380075 CALM1P0DP23 149 aa24.82■■□□□ 1.56
TRIM54-202ENST00000380075 CALM2P0DP24 149 aa24.82■■□□□ 1.56
TRIM54-202ENST00000380075 CALM3P0DP25 149 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms