RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 GADL1Q6ZQY3 521 aa20.54■□□□□ 0.88
RER1-202ENST00000378512 CRNKL1Q9BZJ0 848 aaKnown RBP20.54■□□□□ 0.88
RER1-202ENST00000378512 KIAA0100Q14667 2235 aaKnown RBP20.54■□□□□ 0.88
RER1-202ENST00000378512 GLRX3O76003 335 aaKnown RBP20.53■□□□□ 0.88
RER1-202ENST00000378512 HLA-DOAP06340 250 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 MX1P20591 662 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 KIF22Q14807 665 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 ARHGEF6Q15052 776 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 ZSCAN25Q6NSZ9 544 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 TBC1D2Q9BYX2 928 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 GINM1Q9NU53 330 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 STAP2Q9UGK3 403 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 SAP30BPQ9UHR5 308 aaKnown RBP20.53■□□□□ 0.88
RER1-202ENST00000378512 ERC2O15083 957 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 IGHDP01880 384 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 BCRP11274 1271 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 OSBPP22059 807 aa20.53■□□□□ 0.88
RER1-202ENST00000378512 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
RER1-202ENST00000378512 DCP1AQ9NPI6 582 aaPredicted RBP20.53■□□□□ 0.88
RER1-202ENST00000378512 MYH8P13535 1937 aa20.52■□□□□ 0.88
RER1-202ENST00000378512 JAG1P78504 1218 aa20.52■□□□□ 0.87
RER1-202ENST00000378512 GABPAQ06546 454 aa20.52■□□□□ 0.87
RER1-202ENST00000378512 TTC6Q86TZ1 520 aa20.52■□□□□ 0.87
RER1-202ENST00000378512 PARK7Q99497 189 aaKnown RBP20.52■□□□□ 0.87
RER1-202ENST00000378512 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.87
RER1-202ENST00000378512 ARMT1Q9H993 441 aa20.52■□□□□ 0.87
RER1-202ENST00000378512 SERPINB13Q9UIV8 391 aa20.52■□□□□ 0.87
RER1-202ENST00000378512 MBD4O95243 580 aa20.51■□□□□ 0.87
RER1-202ENST00000378512 FMNL1O95466 1100 aaPredicted RBP20.51■□□□□ 0.87
RER1-202ENST00000378512 PLCD1P51178 756 aa20.51■□□□□ 0.87
RER1-202ENST00000378512 SHROOM1Q2M3G4 852 aaPredicted RBP20.51■□□□□ 0.87
RER1-202ENST00000378512 TREML2Q5T2D2 321 aa20.51■□□□□ 0.87
RER1-202ENST00000378512 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
RER1-202ENST00000378512 SDR42E1Q8WUS8 393 aa20.51■□□□□ 0.87
RER1-202ENST00000378512 ATP8A2Q9NTI2 1148 aa20.51■□□□□ 0.87
RER1-202ENST00000378512 SRRDQ9UH36 339 aa20.51■□□□□ 0.87
RER1-202ENST00000378512 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
RER1-202ENST00000378512 ZFYP08048 801 aaPredicted RBP20.5■□□□□ 0.87
RER1-202ENST00000378512 ASNSP08243 561 aa20.5■□□□□ 0.87
RER1-202ENST00000378512 MTFR1Q15390 333 aa20.5■□□□□ 0.87
RER1-202ENST00000378512 FASTKD5Q7L8L6 764 aaKnown RBP20.5■□□□□ 0.87
RER1-202ENST00000378512 WDR18Q9BV38 432 aa20.5■□□□□ 0.87
RER1-202ENST00000378512 SLC45A1Q9Y2W3 748 aa20.5■□□□□ 0.87
RER1-202ENST00000378512 USP17L5A8MUK1 530 aa20.49■□□□□ 0.87
RER1-202ENST00000378512 PDE1AP54750 535 aa20.49■□□□□ 0.87
RER1-202ENST00000378512 SLC4A8Q2Y0W8 1093 aa20.49■□□□□ 0.87
RER1-202ENST00000378512 NBPF11Q86T75 865 aa20.49■□□□□ 0.87
RER1-202ENST00000378512 ZNF280CQ8ND82 737 aa20.49■□□□□ 0.87
RER1-202ENST00000378512 TMEM106CQ9BVX2 250 aa20.49■□□□□ 0.87
RER1-202ENST00000378512 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
RER1-202ENST00000378512 MYPNQ86TC9 1320 aa20.48■□□□□ 0.87
RER1-202ENST00000378512 RNF113AO15541 343 aaKnown RBP20.48■□□□□ 0.87
RER1-202ENST00000378512 PRKAB2O43741 272 aa20.48■□□□□ 0.87
RER1-202ENST00000378512 PRKCZQ05513 592 aa20.48■□□□□ 0.87
RER1-202ENST00000378512 SH3D19Q5HYK7 790 aa20.48■□□□□ 0.87
RER1-202ENST00000378512 APPBP2Q92624 585 aa20.48■□□□□ 0.87
RER1-202ENST00000378512 OSBP2Q969R2 916 aa20.48■□□□□ 0.87
RER1-202ENST00000378512 MGAMO43451 1857 aa20.48■□□□□ 0.87
RER1-202ENST00000378512 GNRH1P01148 92 aa20.47■□□□□ 0.87
RER1-202ENST00000378512 SHMT1P34896 483 aa20.47■□□□□ 0.87
RER1-202ENST00000378512 SPP2Q13103 211 aa20.47■□□□□ 0.87
RER1-202ENST00000378512 PROCA1Q8NCQ7 364 aaPredicted RBP20.47■□□□□ 0.87
RER1-202ENST00000378512 STRBPQ96SI9 672 aaKnown RBP20.47■□□□□ 0.87
RER1-202ENST00000378512 MCM9Q9NXL9 1143 aa20.47■□□□□ 0.87
RER1-202ENST00000378512 ZBTB21Q9ULJ3 1066 aa20.47■□□□□ 0.87
RER1-202ENST00000378512 NUCB1Q02818 461 aa20.46■□□□□ 0.87
RER1-202ENST00000378512 EVX2Q03828 476 aa20.46■□□□□ 0.87
RER1-202ENST00000378512 TRIM34Q9BYJ4 488 aa20.46■□□□□ 0.87
RER1-202ENST00000378512 AS3MTQ9HBK9 375 aa20.46■□□□□ 0.87
RER1-202ENST00000378512 ZBTB47Q9UFB7 747 aaPredicted RBP20.46■□□□□ 0.87
RER1-202ENST00000378512 AGTPBP1Q9UPW5 1226 aa20.46■□□□□ 0.87
RER1-202ENST00000378512 GDF11O95390 407 aa20.45■□□□□ 0.86
RER1-202ENST00000378512 POLR3DP05423 398 aaPredicted RBP20.45■□□□□ 0.86
RER1-202ENST00000378512 PRMT2P55345 433 aa20.45■□□□□ 0.86
RER1-202ENST00000378512 C12orf60Q5U649 245 aa20.45■□□□□ 0.86
RER1-202ENST00000378512 TICAM2Q86XR7 235 aa20.45■□□□□ 0.86
RER1-202ENST00000378512 RAET1EQ8TD07 263 aa20.45■□□□□ 0.86
RER1-202ENST00000378512 HMGCS2P54868 508 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 FCGRTP55899 365 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
RER1-202ENST00000378512 GIMAP6Q6P9H5 292 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 SMCR8Q8TEV9 937 aaPredicted RBP20.44■□□□□ 0.86
RER1-202ENST00000378512 SHISA4Q96DD7 197 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 LNPKQ9C0E8 428 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 OSBPL3Q9H4L5 887 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 SLC4A4Q9Y6R1 1079 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 GSG1L2A8MUP6 293 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 GRK4P32298 578 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 BACE1P56817 501 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 CERKLQ49MI3 558 aaPredicted RBP20.44■□□□□ 0.86
RER1-202ENST00000378512 ANKRD13CQ8N6S4 541 aa20.44■□□□□ 0.86
RER1-202ENST00000378512 GREB1LQ9C091 1923 aaPredicted RBP20.43■□□□□ 0.86
RER1-202ENST00000378512 GH2P01242 217 aa20.43■□□□□ 0.86
RER1-202ENST00000378512 CYP2D6P10635 497 aa20.43■□□□□ 0.86
RER1-202ENST00000378512 ZMYM1Q5SVZ6 1142 aa20.43■□□□□ 0.86
RER1-202ENST00000378512 SWAP70Q9UH65 585 aa20.43■□□□□ 0.86
RER1-202ENST00000378512 C19orf81C9J6K1 198 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms