RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CDC27P30260 824 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 NTRK3Q16288 839 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 RAB11FIP4Q86YS3 637 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 DHX40Q8IX18 779 aaKnown RBP14.08□□□□□ -0.16
UBR4-203ENST00000375225 LCORLQ8N3X6 602 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 AOPEPQ8N6M6 819 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 KRI1Q8N9T8 703 aaKnown RBP14.08□□□□□ -0.16
UBR4-203ENST00000375225 BRMS1Q9HCU9 246 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 ANKIB1Q9P2G1 1089 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 DACH1Q9UI36 760 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 XDHP47989 1333 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 KIF2AO00139 706 aaPredicted RBP14.07□□□□□ -0.16
UBR4-203ENST00000375225 ZBTB22O15209 634 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 PPFIA3O75145 1194 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 MMP1P03956 469 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 COL11A2P13942 1736 aaPredicted RBP14.07□□□□□ -0.16
UBR4-203ENST00000375225 NPR1P16066 1061 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 AXDND1Q5T1B0 1012 aaPredicted RBP14.07□□□□□ -0.16
UBR4-203ENST00000375225 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 NOSTRINQ8IVI9 506 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 CCDC150Q8NCX0 1101 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 PHKBQ93100 1093 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 PYCARDQ9ULZ3 195 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 LEMD3Q9Y2U8 911 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 PAXBP1Q9Y5B6 917 aa14.07□□□□□ -0.16
UBR4-203ENST00000375225 SNAP23O00161 211 aa14.06□□□□□ -0.16
UBR4-203ENST00000375225 ALDH1B1P30837 517 aa14.06□□□□□ -0.16
UBR4-203ENST00000375225 RESP18Q5W5W9 173 aa14.06□□□□□ -0.16
UBR4-203ENST00000375225 CATIPQ7Z7H3 387 aa14.06□□□□□ -0.16
UBR4-203ENST00000375225 SLC16A10Q8TF71 515 aa14.06□□□□□ -0.16
UBR4-203ENST00000375225 RNF26Q9BY78 433 aaPredicted RBP14.06□□□□□ -0.16
UBR4-203ENST00000375225 HPSEQ9Y251 543 aa14.06□□□□□ -0.16
UBR4-203ENST00000375225 MORC2Q9Y6X9 1032 aaPredicted RBP14.06□□□□□ -0.16
UBR4-203ENST00000375225 CCP110O43303 1012 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 TUBB4AP04350 444 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 LRRC8AQ8IWT6 810 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 ZNF654Q8IZM8 581 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 FANCBQ8NB91 859 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 MASTLQ96GX5 879 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 CACNA1SQ13698 1873 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 MINDY4BA8MYZ0 360 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 PPEF1O14829 653 aaPredicted RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 SRGNP10124 158 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 RXRAP19793 462 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 MARCKSP29966 332 aaPredicted RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 GYG1P46976 350 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 PTPAQ15257 358 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 TPD52L1Q16890 204 aaPredicted RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 SPTY2D1Q68D10 685 aaPredicted RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 CNNM3Q8NE01 707 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 MAP3K14Q99558 947 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 CRNKL1Q9BZJ0 848 aaKnown RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 FAM217BQ9NTX9 383 aaPredicted RBP14.05□□□□□ -0.16
UBR4-203ENST00000375225 TUBE1Q9UJT0 475 aa14.05□□□□□ -0.16
UBR4-203ENST00000375225 RANBP6O60518 1105 aaKnown RBP14.04□□□□□ -0.16
UBR4-203ENST00000375225 DDAH1O94760 285 aa14.04□□□□□ -0.16
UBR4-203ENST00000375225 ATP2B4P23634 1241 aa14.04□□□□□ -0.16
UBR4-203ENST00000375225 IFIT1BQ5T764 474 aaKnown RBP14.04□□□□□ -0.16
UBR4-203ENST00000375225 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
UBR4-203ENST00000375225 MIGA1Q8NAN2 632 aa14.04□□□□□ -0.16
UBR4-203ENST00000375225 NUP133Q8WUM0 1156 aa14.04□□□□□ -0.16
UBR4-203ENST00000375225 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
UBR4-203ENST00000375225 PRKAB2O43741 272 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 SMC2O95347 1197 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 HIBADHP31937 336 aaKnown RBP14.03□□□□□ -0.16
UBR4-203ENST00000375225 CCDC178Q5BJE1 867 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 CT47A1Q5JQC4 288 aaPredicted RBP14.03□□□□□ -0.16
UBR4-203ENST00000375225 SP8Q8IXZ3 490 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 FAM84BQ96KN1 310 aaPredicted RBP14.03□□□□□ -0.16
UBR4-203ENST00000375225 ZSCAN10Q96SZ4 725 aaPredicted RBP14.03□□□□□ -0.16
UBR4-203ENST00000375225 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
UBR4-203ENST00000375225 OSBPL5Q9H0X9 879 aaPredicted RBP14.03□□□□□ -0.16
UBR4-203ENST00000375225 KCND1Q9NSA2 647 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 GGA1Q9UJY5 639 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 MAST2Q6P0Q8 1798 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 MYH6P13533 1939 aa14.03□□□□□ -0.16
UBR4-203ENST00000375225 TNKSO95271 1327 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 H0YIN7 160 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 WDHD1O75717 1129 aaPredicted RBP14.02□□□□□ -0.16
UBR4-203ENST00000375225 KCNJ6P48051 423 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 GPSM2P81274 684 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 MYL5Q02045 173 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 DPCR1Q3MIW9 517 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 STYK1Q6J9G0 422 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 KRBA2Q6ZNG9 492 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 ZNF804AQ7Z570 1209 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 C2CD5Q86YS7 1000 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 AMOTL1Q8IY63 956 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 TRIML1Q8N9V2 468 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 CACTINQ8WUQ7 758 aaKnown RBP14.02□□□□□ -0.16
UBR4-203ENST00000375225 AIFM3Q96NN9 605 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms