RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PPATQ06203 517 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
HSPG2-202ENST00000374676 ABCB5Q2M3G0 1257 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 CYP4F22Q6NT55 531 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 WNK4Q96J92 1243 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 CAPNS2Q96L46 248 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 MKNK2Q9HBH9 465 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 PICK1Q9NRD5 415 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
HSPG2-202ENST00000374676 PHIPQ8WWQ0 1821 aa13.5□□□□□ -0.25
HSPG2-202ENST00000374676 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-202ENST00000374676 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
HSPG2-202ENST00000374676 ORC4O43929 436 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
HSPG2-202ENST00000374676 REC8O95072 547 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 GDF11O95390 407 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 RASA1P20936 1047 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 VEGFBP49765 207 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 NT5C2P49902 561 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 HAND2P61296 217 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 JAG1P78504 1218 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 PPIL2Q13356 520 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 AKNAD1Q5T1N1 836 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-202ENST00000374676 DNAJC5GQ8N7S2 189 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 RNF41Q9H4P4 317 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-202ENST00000374676 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
HSPG2-202ENST00000374676 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
HSPG2-202ENST00000374676 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
HSPG2-202ENST00000374676 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 GH2P01242 217 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 AKR1B1P15121 316 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 NOGQ13253 232 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-202ENST00000374676 STK11IPQ8N1F8 1099 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 WDR18Q9BV38 432 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 NBPF3Q9H094 633 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 KCNH4Q9UQ05 1017 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 AFG3L2Q9Y4W6 797 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 ZHX2Q9Y6X8 837 aa13.48□□□□□ -0.25
HSPG2-202ENST00000374676 GREB1LQ9C091 1923 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-202ENST00000374676 CXCL11O14625 94 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 PRDM1O75626 825 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 CYP21A2P08686 494 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 GUCY1A2P33402 732 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 GJA5P36382 358 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 MAP2K2P36507 400 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-202ENST00000374676 NEDD1Q8NHV4 660 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 AS3MTQ9HBK9 375 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 INCENPQ9NQS7 918 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 PTPRFP10586 1907 aa13.47□□□□□ -0.25
HSPG2-202ENST00000374676 CEP350Q5VT06 3117 aa13.46□□□□□ -0.25
HSPG2-202ENST00000374676 MPHOSPH10O00566 681 aaKnown RBP13.46□□□□□ -0.25
HSPG2-202ENST00000374676 IRF6O14896 467 aa13.46□□□□□ -0.25
HSPG2-202ENST00000374676 SEPT2Q15019 361 aa13.46□□□□□ -0.25
HSPG2-202ENST00000374676 SHROOM1Q2M3G4 852 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-202ENST00000374676 TBC1D10CQ8IV04 446 aa13.46□□□□□ -0.25
HSPG2-202ENST00000374676 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
HSPG2-202ENST00000374676 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
HSPG2-202ENST00000374676 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-202ENST00000374676 IGKV6D-41A0A0C4DH26 115 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-202ENST00000374676 MANSC4A6NHS7 340 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-202ENST00000374676 SLC27A2O14975 620 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 GTF2A2P52657 109 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 INHBEP58166 350 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 TFAP4Q01664 338 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 KIF23Q02241 960 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-202ENST00000374676 RAB3GAP1Q15042 981 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 TSGA10IPQ3SY00 556 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 CREB3L3Q68CJ9 461 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 KCNB2Q92953 911 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 MS4A4AQ96JQ5 239 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 USP26Q9BXU7 913 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 KRT23Q9C075 422 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 CNNM2Q9H8M5 875 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-202ENST00000374676 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
HSPG2-202ENST00000374676 C19orf81C9J6K1 198 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 RANBP6O60518 1105 aaKnown RBP13.44□□□□□ -0.26
HSPG2-202ENST00000374676 AOC2O75106 756 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 TSPY3P0CV98 308 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 TSPY8P0CW00 308 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 TM4SF4P48230 202 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms