RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 VPS37DQ86XT2 251 aa17.14■□□□□ 0.33
SRPK1-204ENST00000373825 MORC4Q8TE76 937 aa17.14■□□□□ 0.33
SRPK1-204ENST00000373825 MYD88Q99836 296 aa17.14■□□□□ 0.33
SRPK1-204ENST00000373825 STMN4Q9H169 189 aaPredicted RBP17.14■□□□□ 0.33
SRPK1-204ENST00000373825 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
SRPK1-204ENST00000373825 ALDH3A1P30838 453 aa17.14■□□□□ 0.33
SRPK1-204ENST00000373825 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 VWA3AA6NCI4 1184 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 EIF3HO15372 352 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■■□□□ 13.2
SRPK1-204ENST00000373825 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 RAB3IL1Q8TBN0 382 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 MIEF2Q96C03 454 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 TSGA10Q9BZW7 698 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 CABP5Q9NP86 173 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 HEXIM1O94992 359 aaKnown RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 CMA1P23946 247 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 ARMC9Q7Z3E5 817 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 SPDYE1Q8NFV5 336 aaPredicted RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 HVCN1Q96D96 273 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 EVI5O60447 810 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 PFKFB2O60825 505 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 NBPF7P0C2Y1 421 aaPredicted RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 MRRFQ96E11 262 aaKnown RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 BLZF1Q9H2G9 400 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 DPH5Q9H2P9 285 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 OSBPL3Q9H4L5 887 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 SLC40A1Q9NP59 571 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 BMP2KQ9NSY1 1161 aaPredicted RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 NKIRAS1Q9NYS0 192 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 NOVA2Q9UNW9 492 aaKnown RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 TRIM14Q14142 442 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 BEND6Q5SZJ8 279 aaPredicted RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 NOA1Q8NC60 698 aaKnown RBP17.13■□□□□ 0.33
SRPK1-204ENST00000373825 UBA5Q9GZZ9 404 aa17.13■□□□□ 0.33
SRPK1-204ENST00000373825 RESTQ13127 1097 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 NLRP14Q86W24 1093 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
SRPK1-204ENST00000373825 TRIM58Q8NG06 486 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 NOX5Q96PH1 765 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 NFU1Q9UMS0 254 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 RGS16O15492 202 aaPredicted RBP17.12■□□□□ 0.33
SRPK1-204ENST00000373825 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
SRPK1-204ENST00000373825 GRAMD1CQ8IYS0 662 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 NSMCE1Q8WV22 266 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 KRT12Q99456 494 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 FUCA2Q9BTY2 467 aa17.12■□□□□ 0.33
SRPK1-204ENST00000373825 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
SRPK1-204ENST00000373825 NBPF9Q3BBW0 867 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 TSG101Q99816 390 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 NOC4LQ9BVI4 516 aaKnown RBP17.11■□□□□ 0.33
SRPK1-204ENST00000373825 OSBPL1AQ9BXW6 950 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 FAM135BQ49AJ0 1406 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 ZRANB2O95218 330 aaKnown RBP eCLIP17.11■□□□□ 0.33
SRPK1-204ENST00000373825 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 VPS52Q8N1B4 723 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 VCX3BQ9H321 246 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 VCX3AQ9NNX9 186 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 EXOC1Q9NV70 894 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 SCOCQ9UIL1 159 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 KCNG1Q9UIX4 513 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 ESYT3A0FGR9 886 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
SRPK1-204ENST00000373825 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 PRM3Q9NNZ6 103 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 FAM207AQ9NSI2 230 aaPredicted RBP17.11■□□□□ 0.33
SRPK1-204ENST00000373825 SH2D4BQ5SQS7 431 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
SRPK1-204ENST00000373825 ELAC2Q9BQ52 826 aaKnown RBP17.11■□□□□ 0.33
SRPK1-204ENST00000373825 NSD2O96028 1365 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 RPAP1Q9BWH6 1393 aaPredicted RBP17.1■□□□□ 0.33
SRPK1-204ENST00000373825 PDHBP11177 359 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 CDC25CP30307 473 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
SRPK1-204ENST00000373825 ASIC1P78348 528 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 KRT40Q6A162 431 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 EHD4Q9H223 541 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 HYOU1Q9Y4L1 999 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
SRPK1-204ENST00000373825 CCDC26Q8TAB7 109 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 SMC6Q96SB8 1091 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 CNGA1P29973 690 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 PAK1Q13153 545 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 KLHL14Q9P2G3 628 aa17.1■□□□□ 0.33
SRPK1-204ENST00000373825 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
SRPK1-204ENST00000373825 TRAF1Q13077 416 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 CCT8L2Q96SF2 557 aa17.09■□□□□ 0.33
SRPK1-204ENST00000373825 INTS9Q9NV88 658 aaKnown RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 MTRF1LQ9UGC7 380 aaKnown RBP17.09■□□□□ 0.33
SRPK1-204ENST00000373825 L1RE1Q9UN81 338 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms