RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 EVCP57679 992 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 AMPD3Q01432 767 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 IFFO1Q0D2I5 559 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 USH1GQ495M9 461 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 DCAF17Q5H9S7 520 aaPredicted RBP10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 RNF187Q5TA31 235 aaPredicted RBP10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 HAUS7Q99871 368 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 FANCLQ9NW38 375 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 CCNT1O60563 726 aaKnown RBP10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 CTSWP56202 376 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 TBC1D8BQ0IIM8 1120 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 RAPGEF1Q13905 1077 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 HLFQ16534 295 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 CTR9Q6PD62 1173 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 IFT81Q8WYA0 676 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 SLF1Q9BQI6 1058 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 STAP2Q9UGK3 403 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 ARHGEF10O15013 1369 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 MAST3O60307 1309 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 ELP1O95163 1332 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 DDX39AO00148 427 aaKnown RBP10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TRAF5O00463 557 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 PDE4DQ08499 809 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TRAPPC3LQ5T215 181 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 C11orf57Q6ZUT1 292 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 ZNF654Q8IZM8 581 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CTAGE15A4D2H0 777 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 ERLIN2O94905 339 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CTAGE8P0CG41 777 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 GTF2IP78347 998 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 GRM1Q13255 1194 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 DPCR1Q3MIW9 517 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CTAGE6Q86UF2 777 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 KSR1Q8IVT5 923 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CTAGE4Q8IX94 777 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CPXCR1Q8N123 301 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 KRT222Q8N1A0 295 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 SMARCC2Q8TAQ2 1214 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 LUC7L2Q9Y383 392 aaKnown RBP10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 COL18A1P39060 1754 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TBCAO75347 108 aaKnown RBP10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CASP1P29466 404 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 RPS8P62241 208 aaKnown RBP10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 ERCC6LQ2NKX8 1250 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TTC38Q5R3I4 469 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 KRT79Q5XKE5 535 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TTC16Q8NEE8 873 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 DYDC1Q8WWB3 177 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CPVLQ9H3G5 476 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 ZDHHC9Q9Y397 364 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 FSD2A1L4K1 749 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 SORBS3O60504 671 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 DEXIO95424 95 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 KRT9P35527 623 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TBC1D10BQ4KMP7 808 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 CCDC122Q5T0U0 273 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 RDH13Q8NBN7 331 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 KIF2CQ99661 725 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TM6SF1Q9BZW5 370 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 BCL2L12Q9HB09 334 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 C6orf50Q9HD87 102 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 COPRSQ9NQ92 184 aa10.28□□□□□ -0.76
SMARCA1-202ENST00000371122 TNKSO95271 1327 aa10.27□□□□□ -0.76
SMARCA1-202ENST00000371122 ERBB3P21860 1342 aa10.27□□□□□ -0.76
SMARCA1-202ENST00000371122 TOM1O60784 492 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 SEPT7Q16181 437 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 RILPL1Q5EBL4 403 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 ZNF804AQ7Z570 1209 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 ANKRD13CQ8N6S4 541 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 RRP36Q96EU6 259 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 NLRC4Q9NPP4 1024 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 KIAA1468Q9P260 1216 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 RSPH14Q9UHP6 348 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 PCDHA5Q9Y5H7 936 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 KDRP35968 1356 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 FRMPD2Q68DX3 1309 aaPredicted RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 TLDC2A0PJX2 215 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 HARSP12081 509 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 USPL1Q5W0Q7 1092 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 SLF2Q8IX21 1173 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 PGBD1Q96JS3 809 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 ZNF215Q9UL58 517 aaPredicted RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 HGSO14964 777 aaPredicted RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 USP6P35125 1406 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 CHRNDQ07001 517 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 INF2Q27J81 1249 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 TMEM87BQ96K49 555 aa10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 FAM207AQ9NSI2 230 aaPredicted RBP10.27□□□□□ -0.77
SMARCA1-202ENST00000371122 ZEB2O60315 1214 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 PDE8BO95263 885 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 GNAT2P19087 354 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 PPARAQ07869 468 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 NAA30Q147X3 362 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms