RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
VMA21-202ENST00000370361 USP17L10C9JJH3 530 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 GJA8P48165 433 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 FLT3LGP49771 235 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 IRX3P78415 501 aaPredicted RBP19.6■□□□□ 0.73
VMA21-202ENST00000370361 PDE3AQ14432 1141 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
VMA21-202ENST00000370361 ASCC2Q9H1I8 757 aaPredicted RBP19.6■□□□□ 0.73
VMA21-202ENST00000370361 DNAJC18Q9H819 358 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.6■□□□□ 0.73
VMA21-202ENST00000370361 SERPINB13Q9UIV8 391 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 ZBTB21Q9ULJ3 1066 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 MYH1P12882 1939 aa19.6■□□□□ 0.73
VMA21-202ENST00000370361 ADCY3O60266 1144 aa19.59■□□□□ 0.73
VMA21-202ENST00000370361 CCL5P13501 91 aa19.59■□□□□ 0.73
VMA21-202ENST00000370361 MTMR2Q13614 643 aa19.59■□□□□ 0.73
VMA21-202ENST00000370361 RRP1BQ14684 758 aaKnown RBP19.59■□□□□ 0.73
VMA21-202ENST00000370361 MORF4L1Q9UBU8 362 aa19.59■□□□□ 0.73
VMA21-202ENST00000370361 COG6Q9Y2V7 657 aa19.59■□□□□ 0.73
VMA21-202ENST00000370361 DYNLL1P63167 89 aaKnown RBP19.58■□□□□ 0.72
VMA21-202ENST00000370361 TATDN1Q6P1N9 297 aa19.58■□□□□ 0.72
VMA21-202ENST00000370361 MIGA1Q8NAN2 632 aa19.58■□□□□ 0.72
VMA21-202ENST00000370361 CRNKL1Q9BZJ0 848 aaKnown RBP19.58■□□□□ 0.72
VMA21-202ENST00000370361 RNF208Q9H0X6 261 aa19.58■□□□□ 0.72
VMA21-202ENST00000370361 IL1RAPL2Q9NP60 686 aa19.58■□□□□ 0.72
VMA21-202ENST00000370361 MAGEB6P1A0A0J9YX57 407 aa19.57■□□□□ 0.72
VMA21-202ENST00000370361 USP14P54578 494 aa19.57■□□□□ 0.72
VMA21-202ENST00000370361 MTFR1Q15390 333 aa19.57■□□□□ 0.72
VMA21-202ENST00000370361 RIOK1Q9BRS2 568 aaKnown RBP19.57■□□□□ 0.72
VMA21-202ENST00000370361 ANTXR1Q9H6X2 564 aa19.57■□□□□ 0.72
VMA21-202ENST00000370361 PCDH10Q9P2E7 1040 aa19.57■□□□□ 0.72
VMA21-202ENST00000370361 SAP30BPQ9UHR5 308 aaKnown RBP19.57■□□□□ 0.72
VMA21-202ENST00000370361 GABRQQ9UN88 632 aa19.57■□□□□ 0.72
VMA21-202ENST00000370361 ECM2O94769 699 aaPredicted RBP19.56■□□□□ 0.72
VMA21-202ENST00000370361 MYCP01106 439 aaPredicted RBP19.56■□□□□ 0.72
VMA21-202ENST00000370361 SLC9C2Q5TAH2 1124 aa19.56■□□□□ 0.72
VMA21-202ENST00000370361 USP17L2Q6R6M4 530 aa19.56■□□□□ 0.72
VMA21-202ENST00000370361 C12orf42Q96LP6 360 aa19.56■□□□□ 0.72
VMA21-202ENST00000370361 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.56■□□□□ 0.72
VMA21-202ENST00000370361 PDE6AP16499 860 aa19.55■□□□□ 0.72
VMA21-202ENST00000370361 SOCS4Q8WXH5 440 aa19.55■□□□□ 0.72
VMA21-202ENST00000370361 HTATIP2Q9BUP3 242 aa19.55■□□□□ 0.72
VMA21-202ENST00000370361 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
VMA21-202ENST00000370361 DDX60LQ5H9U9 1706 aaKnown RBP19.54■□□□□ 0.72
VMA21-202ENST00000370361 GDF11O95390 407 aa19.54■□□□□ 0.72
VMA21-202ENST00000370361 INHAP05111 366 aa19.54■□□□□ 0.72
VMA21-202ENST00000370361 ATP5JP18859 108 aa19.54■□□□□ 0.72
VMA21-202ENST00000370361 CERKLQ49MI3 558 aaPredicted RBP19.54■□□□□ 0.72
VMA21-202ENST00000370361 SIRT2Q8IXJ6 389 aa19.54■□□□□ 0.72
VMA21-202ENST00000370361 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
VMA21-202ENST00000370361 GPRC5AQ8NFJ5 357 aa19.54■□□□□ 0.72
VMA21-202ENST00000370361 U2AF1L4Q8WU68 220 aaKnown RBP19.54■□□□□ 0.72
VMA21-202ENST00000370361 SHISA4Q96DD7 197 aa19.54■□□□□ 0.72
VMA21-202ENST00000370361 GH2P01242 217 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 HMGCRP04035 888 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 POLR3DP05423 398 aaPredicted RBP19.53■□□□□ 0.72
VMA21-202ENST00000370361 MAPK4P31152 587 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 HERVK_113P62684 666 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 ABCB5Q2M3G0 1257 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
VMA21-202ENST00000370361 FEZ1Q99689 392 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 KIAA1683Q9H0B3 1180 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 NDUFB9Q9Y6M9 179 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 NAV1Q8NEY1 1877 aa19.53■□□□□ 0.72
VMA21-202ENST00000370361 ZNF532Q9HCE3 1301 aa19.52■□□□□ 0.72
VMA21-202ENST00000370361 GOLIM4O00461 696 aa19.52■□□□□ 0.72
VMA21-202ENST00000370361 SGPL1O95470 568 aa19.52■□□□□ 0.72
VMA21-202ENST00000370361 UBE2Q1Q7Z7E8 422 aa19.52■□□□□ 0.72
VMA21-202ENST00000370361 PAK6Q9NQU5 681 aaPredicted RBP19.52■□□□□ 0.72
VMA21-202ENST00000370361 PAG1Q9NWQ8 432 aa19.52■□□□□ 0.72
VMA21-202ENST00000370361 SWAP70Q9UH65 585 aa19.52■□□□□ 0.72
VMA21-202ENST00000370361 USP17L15C9J2P7 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L13C9JLJ4 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L11C9JVI0 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L18D6R9N7 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L22D6RA61 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L17D6RBQ6 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L19D6RCP7 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L20D6RJB6 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 XRCC5P13010 732 aaKnown RBP19.51■□□□□ 0.71
VMA21-202ENST00000370361 JAG1P78504 1218 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 USP17L24Q0WX57 530 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 ZSCAN25Q6NSZ9 544 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 AMOTL1Q8IY63 956 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 HAUS7Q99871 368 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 LRRCC1Q9C099 1032 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 UNC93B1Q9H1C4 597 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 ATP8A2Q9NTI2 1148 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 DOCK3Q8IZD9 2030 aa19.51■□□□□ 0.71
VMA21-202ENST00000370361 TCRBV5S4A2TA0A5A2 114 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 APBB1O00213 710 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 FARP2O94887 1054 aaPredicted RBP19.5■□□□□ 0.71
VMA21-202ENST00000370361 ELNP15502 786 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 CCNA1P78396 465 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 GABPAQ06546 454 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 CCAR1Q8IX12 1150 aaKnown RBP19.5■□□□□ 0.71
VMA21-202ENST00000370361 DDRGK1Q96HY6 314 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 P2RX7Q99572 595 aaKnown RBP19.5■□□□□ 0.71
VMA21-202ENST00000370361 NUDT12Q9BQG2 462 aa19.5■□□□□ 0.71
VMA21-202ENST00000370361 EMILIN3Q9NT22 766 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms