RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ZC3H15Q8WU90 426 aaKnown RBP12.9□□□□□ -0.34
BRCC3-204ENST00000369462 SNX21Q969T3 373 aa12.9□□□□□ -0.34
BRCC3-204ENST00000369462 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
BRCC3-204ENST00000369462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.34
BRCC3-204ENST00000369462 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
BRCC3-204ENST00000369462 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
BRCC3-204ENST00000369462 NBPF12Q5TAG4 269 aaPredicted RBP12.89□□□□□ -0.35
BRCC3-204ENST00000369462 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 HSCBQ8IWL3 235 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 BRF1Q92994 677 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 HERC5Q9UII4 1024 aaKnown RBP12.89□□□□□ -0.35
BRCC3-204ENST00000369462 WDR90Q96KV7 1748 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 SCN4AP35499 1836 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 IFIT3O14879 490 aaKnown RBP12.89□□□□□ -0.35
BRCC3-204ENST00000369462 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 KRT26Q7Z3Y9 468 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 NMRK2Q9NPI5 230 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 POLR2AP24928 1970 aaKnown RBP12.89□□□□□ -0.35
BRCC3-204ENST00000369462 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 NMT2O60551 498 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 SART3Q15020 963 aaKnown RBP12.89□□□□□ -0.35
BRCC3-204ENST00000369462 TMEM67Q5HYA8 995 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 DLK2Q6UY11 383 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 IGDCC4Q8TDY8 1250 aa12.89□□□□□ -0.35
BRCC3-204ENST00000369462 ADM5C9JUS6 153 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 BECN1Q14457 450 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-204ENST00000369462 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-204ENST00000369462 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
BRCC3-204ENST00000369462 TNKSO95271 1327 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 ERICH2A1L162 156 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 AKR1B1P15121 316 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 MCM2P49736 904 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-204ENST00000369462 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 LIMCH1Q9UPQ0 1083 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 PPP2R3BQ9Y5P8 575 aa12.88□□□□□ -0.35
BRCC3-204ENST00000369462 SIPA1L1O43166 1804 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 MPHOSPH10O00566 681 aaKnown RBP12.87□□□□□ -0.35
BRCC3-204ENST00000369462 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 NT5C2P49902 561 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
BRCC3-204ENST00000369462 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
BRCC3-204ENST00000369462 TBC1D12O60347 775 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 FBXL16Q8N461 479 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
BRCC3-204ENST00000369462 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 CCDC17Q96LX7 622 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
BRCC3-204ENST00000369462 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
BRCC3-204ENST00000369462 GDF11O95390 407 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 WTAPQ15007 396 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 RRP1BQ14684 758 aaKnown RBP12.86□□□□□ -0.35
BRCC3-204ENST00000369462 SEC23AQ15436 765 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 SHROOM1Q2M3G4 852 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-204ENST00000369462 SUPT20HL1Q3ZLR7 823 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 MAP1SQ66K74 1059 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-204ENST00000369462 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRCC3-204ENST00000369462 GLIS2Q9BZE0 524 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-204ENST00000369462 STX8Q9UNK0 236 aa12.86□□□□□ -0.35
BRCC3-204ENST00000369462 LIFRP42702 1097 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 CDC37L1Q7L3B6 337 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 CEP95Q96GE4 821 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 IPO9Q96P70 1041 aaKnown RBP12.85□□□□□ -0.35
BRCC3-204ENST00000369462 FZD1Q9UP38 647 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 KLF18A0A0U1RQI7 1052 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 LARGE1O95461 756 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 ME3Q16798 604 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
BRCC3-204ENST00000369462 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
BRCC3-204ENST00000369462 GH2P01242 217 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 JAG1P78504 1218 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 STK3Q13188 491 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 PRKG1Q13976 671 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 RCSD1Q6JBY9 416 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 CLEC10AQ8IUN9 316 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms