RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 IL17RBQ9NRM6 502 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 ASTN2O75129 1339 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-201ENST00000343575 TCP10L2B9ZVM9 353 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 DDNO94850 711 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-201ENST00000343575 HSP90AA1P07900 732 aaKnown RBP17.24■□□□□ 0.35
CXCL12-201ENST00000343575 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
CXCL12-201ENST00000343575 ENAHQ8N8S7 591 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-201ENST00000343575 GTF3C6Q969F1 213 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 ZSCAN10Q96SZ4 725 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-201ENST00000343575 GPRC5DQ9NZD1 345 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 PGAP2Q9UHJ9 254 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 SERPINB13Q9UIV8 391 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 KLF18A0A0U1RQI7 1052 aa17.23■□□□□ 0.35
CXCL12-201ENST00000343575 TFAP4Q01664 338 aa17.23■□□□□ 0.35
CXCL12-201ENST00000343575 RCSD1Q6JBY9 416 aa17.23■□□□□ 0.35
CXCL12-201ENST00000343575 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
CXCL12-201ENST00000343575 EHD4Q9H223 541 aa17.23■□□□□ 0.35
CXCL12-201ENST00000343575 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
CXCL12-201ENST00000343575 TNKSO95271 1327 aa17.23■□□□□ 0.35
CXCL12-201ENST00000343575 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-201ENST00000343575 SHMT1P34896 483 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 TBC1D10BQ4KMP7 808 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-201ENST00000343575 FKBP1CQ5VVH2 108 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 APOA5Q6Q788 366 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 CDAN1Q8IWY9 1227 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 NAP1L5Q96NT1 182 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-201ENST00000343575 GBP4Q96PP9 640 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.35
CXCL12-201ENST00000343575 GRPEL1Q9HAV7 217 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
CXCL12-201ENST00000343575 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 EPS15P42566 896 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
CXCL12-201ENST00000343575 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
CXCL12-201ENST00000343575 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
CXCL12-201ENST00000343575 FAM196BA6NMK8 535 aa17.21■□□□□ 0.35
CXCL12-201ENST00000343575 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
CXCL12-201ENST00000343575 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
CXCL12-201ENST00000343575 FAM151AQ8WW52 585 aa17.21■□□□□ 0.35
CXCL12-201ENST00000343575 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
CXCL12-201ENST00000343575 VEZTQ9HBM0 779 aa17.21■□□□□ 0.35
CXCL12-201ENST00000343575 PI4KBQ9UBF8 816 aa17.21■□□□□ 0.35
CXCL12-201ENST00000343575 HLA-DOAP06340 250 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-201ENST00000343575 PKP1Q13835 747 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 WTAPQ15007 396 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 IQCA1Q86XH1 822 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-201ENST00000343575 MYL10Q9BUA6 226 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 TMEM39BQ9GZU3 492 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-201ENST00000343575 TCP11L1Q9NUJ3 509 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 TMOD2Q9NZR1 351 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 RXRAP19793 462 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 NT5C2P49902 561 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
CXCL12-201ENST00000343575 FAM83AQ86UY5 434 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 ZSCAN29Q8IWY8 852 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-201ENST00000343575 NEDD1Q8NHV4 660 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
CXCL12-201ENST00000343575 CWC22Q9HCG8 908 aaKnown RBP17.2■□□□□ 0.34
CXCL12-201ENST00000343575 GOLGA8BA8MQT2 603 aa17.19■□□□□ 0.34
CXCL12-201ENST00000343575 MYO1BO43795 1136 aa17.19■□□□□ 0.34
CXCL12-201ENST00000343575 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
CXCL12-201ENST00000343575 FOXP4Q8IVH2 680 aaPredicted RBP17.19■□□□□ 0.34
CXCL12-201ENST00000343575 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
CXCL12-201ENST00000343575 SWAP70Q9UH65 585 aa17.19■□□□□ 0.34
CXCL12-201ENST00000343575 ESPNB1AK53 854 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 H7C1D1 291 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 JAK2O60674 1132 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 AKR1B1P15121 316 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 CDC27P30260 824 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 NOVP48745 357 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
CXCL12-201ENST00000343575 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-201ENST00000343575 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 CSRNP1Q96S65 589 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-201ENST00000343575 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-201ENST00000343575 GREB1LQ9C091 1923 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-201ENST00000343575 ERICH2A1L162 156 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 TATDN1Q6P1N9 297 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 NFXL1Q6ZNB6 911 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
CXCL12-201ENST00000343575 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 TEPSINQ96N21 525 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 ZDHHC9Q9Y397 364 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
CXCL12-201ENST00000343575 MYH8P13535 1937 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 IGKV6D-41A0A0C4DH26 115 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 CCDC69A6NI79 296 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 GJB2P29033 226 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 JAG1P78504 1218 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 TROAPQ12815 778 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms