RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 PARP1P09874 1014 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 FILIP1LQ4L180 1135 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 ZNF654Q8IZM8 581 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 FBXL16Q8N461 479 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 NSUN4Q96CB9 384 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 SMC2O95347 1197 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 MAP3K11Q16584 847 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 ME3Q16798 604 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 LCORLQ8N3X6 602 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 RNF26Q9BY78 433 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 IQCA1LA6NCM1 817 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 TOP1P11387 765 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 SGMS1Q86VZ5 419 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 PI16Q6UXB8 463 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 FERMT3Q86UX7 667 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 TGFBRAP1Q8WUH2 860 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 LRRC2Q9BYS8 371 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 LRRC27Q9C0I9 530 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 MTFR1LQ9H019 292 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 ANAPC4Q9UJX5 808 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 DOT1LQ8TEK3 1739 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 SIPA1L3O60292 1781 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 ERMNQ8TAM6 284 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 TAOK3Q9H2K8 898 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 TNKSO95271 1327 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 STK36Q9NRP7 1315 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 ZBED4O75132 1171 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 IFNAR1P17181 557 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 PDIA3P30101 505 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 TFAP4Q01664 338 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 ZFYVE27Q5T4F4 411 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 FERMT2Q96AC1 680 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 MRIQ9BWK5 157 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 SH2B2O14492 632 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 YEATS4O95619 227 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 IL1R1P14778 569 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 SCARF1Q14162 830 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 FANCBQ8NB91 859 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 SMCR8Q8TEV9 937 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 ADCK5Q3MIX3 580 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 TPCN1Q9ULQ1 816 aa9.79□□□□□ -0.84
PDLIM5-201ENST00000317968 GPATCH4Q5T3I0 446 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 CLEC17AQ6ZS10 378 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 AKT1S1Q96B36 256 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 PRKAG2Q9UGJ0 569 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 CA8P35219 290 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 APOA5Q6Q788 366 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 MAPKAPK5Q8IW41 473 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 MB21D2Q8IYB1 491 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 SERPINB13Q9UIV8 391 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 CICQ96RK0 1608 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 TRIM75PA6NK02 468 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 NEBLO76041 1014 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 CEP57L1Q8IYX8 460 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 LUC7LQ9NQ29 371 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 GSG1L2A8MUP6 293 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 KRT2P35908 639 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 C2orf69Q8N8R5 385 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 KIF2CQ99661 725 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 CIAPIN1Q6FI81 312 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 SMARCC2Q8TAQ2 1214 aa9.78□□□□□ -0.84
PDLIM5-201ENST00000317968 CTDSPL2Q05D32 466 aa9.77□□□□□ -0.84
PDLIM5-201ENST00000317968 EZH2Q15910 746 aaKnown RBP9.77□□□□□ -0.84
PDLIM5-201ENST00000317968 MAP3K14Q99558 947 aa9.77□□□□□ -0.84
PDLIM5-201ENST00000317968 PI4KBQ9UBF8 816 aa9.77□□□□□ -0.84
PDLIM5-201ENST00000317968 CPA1P15085 419 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 EXOSC10Q01780 885 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 DCP1AQ9NPI6 582 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 SPEF2Q9C093 1822 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 GPR75-ASB3A0A0A6YYF3 556 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 OSBPP22059 807 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 RFX1P22670 979 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 CCNA1P78396 465 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 CCDC173Q0VFZ6 552 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 UVSSAQ2YD98 709 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 ASPRV1Q53RT3 343 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 TEX2Q8IWB9 1127 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 RPS12P25398 132 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 KANSL2Q9H9L4 492 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 ANO10Q9NW15 660 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 ELP1O95163 1332 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 SMTNL1A8MU46 457 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 ENTPD3O75355 529 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 DDR1Q08345 913 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 SDR42E1Q8WUS8 393 aa9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 MRPS27Q92552 414 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 AFDNP55196 1824 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-201ENST00000317968 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 FBXO18Q8NFZ0 1043 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 NRAPQ86VF7 1730 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 ARFGEF2Q9Y6D5 1785 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms