RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 ANKZF1Q9H8Y5 726 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 MARCKSP29966 332 aaPredicted RBP21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 CCDC57Q2TAC2 916 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 JMYQ8N9B5 988 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 ZNF512BQ96KM6 892 aaPredicted RBP21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 BAG1Q99933 345 aaPredicted RBP21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 ZMYM6O95789 1325 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 CCDC151A5D8V7 595 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 PHACTR2O75167 634 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 CDKL5O76039 1030 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 FKBP4Q02790 459 aaKnown RBP eCLIP21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 MTF1Q14872 753 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 BEND6Q5SZJ8 279 aaPredicted RBP21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 CCDC12Q8WUD4 166 aaPredicted RBP21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 PUS3Q9BZE2 481 aaKnown RBP21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 TAOK2Q9UL54 1235 aa21.53■■□□□ 1.04
HERPUD2-201ENST00000311350 EIF3CLB5ME19 914 aaKnown RBP21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 WDHD1O75717 1129 aaPredicted RBP21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 PNOCQ13519 176 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 WASHC4Q2M389 1173 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 AMIGO3Q86WK7 504 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 ELOA2Q8IYF1 753 aaPredicted RBP21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 DRC1Q96MC2 740 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 EIF3CQ99613 913 aaKnown RBP21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 HPSEQ9Y251 543 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 JRKLQ9Y4A0 524 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 ZNF213O14771 459 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 CBFA2T2O43439 604 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 POLD1P28340 1107 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 RAB11FIP4Q86YS3 637 aa21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 MRPL44Q9H9J2 332 aaKnown RBP21.52■■□□□ 1.04
HERPUD2-201ENST00000311350 MYL5Q02045 173 aa21.51■■□□□ 1.03
HERPUD2-201ENST00000311350 TTC31Q49AM3 519 aaPredicted RBP21.51■■□□□ 1.03
HERPUD2-201ENST00000311350 FCHSD1Q86WN1 690 aa21.51■■□□□ 1.03
HERPUD2-201ENST00000311350 KIF28PB7ZC32 967 aa21.51■■□□□ 1.03
HERPUD2-201ENST00000311350 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.51■■□□□ 1.03
HERPUD2-201ENST00000311350 YY1AP1Q9H869 796 aa21.51■■□□□ 1.03
HERPUD2-201ENST00000311350 MAP3K15Q6ZN16 1313 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 GNPATO15228 680 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 CSF1RP07333 972 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 MAGEA9P43362 315 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 CHMP4BP1P59074 171 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 TCIRG1Q13488 830 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 ABCB6Q9NP58 842 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 A1BGP04217 495 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 PCCAP05165 728 aaPredicted RBP21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 BRD3Q15059 726 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 GOLGA6L1Q8N7Z2 621 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 TC2NQ8N9U0 490 aa21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 FHDC1Q9C0D6 1143 aaPredicted RBP21.5■■□□□ 1.03
HERPUD2-201ENST00000311350 GPAA1O43292 621 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 IVLP07476 585 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 ADORA1P30542 326 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 HAND2P61296 217 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 PDE4BQ07343 736 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 SART3Q15020 963 aaKnown RBP21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 CPLX2Q6PUV4 134 aaKnown RBP21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 SMIM5Q71RC9 77 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 ANGEL1Q9UNK9 670 aaKnown RBP21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 ZNF831Q5JPB2 1677 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 CDC27P30260 824 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 TRDNQ13061 729 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 SKIDA1Q1XH10 827 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 CTR9Q6PD62 1173 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 LRRC31Q6UY01 552 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 PUS7LQ9H0K6 701 aaKnown RBP21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 ZBTB3Q9H5J0 574 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 LZTFL1Q9NQ48 299 aa21.49■■□□□ 1.03
HERPUD2-201ENST00000311350 ZAP70P43403 619 aa21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 SYKP43405 635 aa21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 GEMIN8Q9NWZ8 242 aaKnown RBP21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 MYH7P12883 1935 aa21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 CUTAO60888 179 aa21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 TBX2Q13207 712 aaPredicted RBP21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 HDXQ7Z353 690 aa21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.48■■□□□ 1.03
HERPUD2-201ENST00000311350 SH2B2O14492 632 aaPredicted RBP21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 RHOXF2BP0C7M4 288 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 GUCY2CP25092 1073 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 PTPAQ15257 358 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 TTF1Q15361 905 aaPredicted RBP21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 NOM1Q5C9Z4 860 aaKnown RBP21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 MSL1Q68DK7 614 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 TMEM87BQ96K49 555 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 RHOXF2Q9BQY4 288 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 SYT17Q9BSW7 474 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 L1RE1Q9UN81 338 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 ADD2P35612 726 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 RC3H1Q5TC82 1133 aaKnown RBP21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 JAKMIP3Q5VZ66 844 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 RESP18Q5W5W9 173 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 SRGAP1Q7Z6B7 1085 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 FOXP4Q8IVH2 680 aaPredicted RBP21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 ALG1Q9BT22 464 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 RIC1Q4ADV7 1423 aa21.47■■□□□ 1.03
HERPUD2-201ENST00000311350 CDHR2Q9BYE9 1310 aa21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 CNTNAP4Q9C0A0 1308 aa21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 UBR3Q6ZT12 1888 aa21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 STK36Q9NRP7 1315 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms