RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 TTC41PQ6P2S7 1318 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 ARHGAP42A6NI28 874 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 MAGEA1P43355 309 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 TCP10Q12799 353 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 RIPOR2Q9Y4F9 1068 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 PCF11O94913 1555 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 RPSAP08865 295 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 MAP2K2P36507 400 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 DCLK2Q8N568 766 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 ZC3H12CQ9C0D7 883 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 PPP1R12AO14974 1030 aaPredicted RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 LONRF2Q1L5Z9 754 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 DIS3L2Q8IYB7 885 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 HS1BP3Q53T59 392 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 PRR16Q569H4 304 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 CNNM4Q6P4Q7 775 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 CXorf38Q8TB03 319 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 EDC3Q96F86 508 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 VPS54Q9P1Q0 977 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 HERC4Q5GLZ8 1057 aaPredicted RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 TTC38Q5R3I4 469 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 ANO3Q9BYT9 981 aa18.66■□□□□ 0.58
TSPAN3-201ENST00000267970 C2CD5Q86YS7 1000 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 TEX11Q8IYF3 940 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 CALUO43852 315 aaPredicted RBP18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 OPHN1O60890 802 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 POSTNQ15063 836 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 SLC9C1Q4G0N8 1177 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 DCUN1D2Q6PH85 259 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 CEP128Q6ZU80 1094 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 RNF10Q8N5U6 811 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 SNX29Q8TEQ0 813 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 KLHL30Q0D2K2 578 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 ZNF827Q17R98 1081 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 MUM1Q2TAK8 710 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 CTAGE3PQ8IX95 158 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 TMEM63CQ9P1W3 806 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 GNAT2P19087 354 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 ZNF408Q9H9D4 720 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 SERTAD1Q9UHV2 236 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 SMIM24O75264 130 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 ALDH1L1O75891 902 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 TUBB4AP04350 444 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 ZSCAN26Q16670 478 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 TSNAXIP1Q2TAA8 658 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 NAA35Q5VZE5 725 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 PEX26Q7Z412 305 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 CPXCR1Q8N123 301 aa18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 MRPL44Q9H9J2 332 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-201ENST00000267970 DENND2CQ68D51 928 aa18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 SEC31AO94979 1220 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 COG7P83436 770 aa18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 U2AF1L4Q8WU68 220 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 LSM14BQ9BX40 385 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 FOXD4Q12950 439 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 KCTD16Q68DU8 428 aa18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 INTS4Q96HW7 963 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-201ENST00000267970 CD19P15391 556 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 CCDC38Q502W7 563 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 PPIP5K1Q6PFW1 1433 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 ZMYND10O75800 440 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 A0A087WWV3 80 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 I3L4J1 428 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 ITGA6P23229 1130 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 PLCD1P51178 756 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 LLGL1Q15334 1064 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 LIN9Q5TKA1 542 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 TAOK1Q7L7X3 1001 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 MAGED2Q9UNF1 606 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 PCDHB13Q9Y5F0 798 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 CTNNA1P35221 906 aaKnown RBP18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 RPS6KA1Q15418 735 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 GBP5Q96PP8 586 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 TSPYL2Q9H2G4 693 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 XAB2Q9HCS7 855 aaKnown RBP18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 SEPT10Q9P0V9 454 aa18.63■□□□□ 0.57
TSPAN3-201ENST00000267970 SOS1Q07889 1333 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 NR1I2O75469 434 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 IFNB1P01574 187 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 PPME1Q9Y570 386 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 ARHGEF35A5YM69 484 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 KCNK3O14649 394 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 GPAA1O43292 621 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 DEXIO95424 95 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 PPP2R5AQ15172 486 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 TBC1D10BQ4KMP7 808 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 XAGE2Q96GT9 111 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 CETN3O15182 167 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms