RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SCYL3Q8IZE3 742 aa16.73■□□□□ 0.27
VPS25-201ENST00000253794 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
VPS25-201ENST00000253794 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
VPS25-201ENST00000253794 DOCK1Q14185 1865 aa16.72■□□□□ 0.27
VPS25-201ENST00000253794 ASNSP08243 561 aa16.72■□□□□ 0.27
VPS25-201ENST00000253794 VGLL4Q14135 290 aa16.72■□□□□ 0.27
VPS25-201ENST00000253794 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
VPS25-201ENST00000253794 CNNM2Q9H8M5 875 aa16.72■□□□□ 0.27
VPS25-201ENST00000253794 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
VPS25-201ENST00000253794 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
VPS25-201ENST00000253794 NEDD4P46934 1319 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 E7EWF7 191 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 HUNKP57058 714 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 C1QTNF8P60827 252 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 JAG1P78504 1218 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 PRKG1Q13976 671 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 TTLL12Q14166 644 aaPredicted RBP16.71■□□□□ 0.27
VPS25-201ENST00000253794 STOX1Q6ZVD7 989 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
VPS25-201ENST00000253794 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 KRT23Q9C075 422 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 ZBTB21Q9ULJ3 1066 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 CSADQ9Y600 493 aa16.71■□□□□ 0.27
VPS25-201ENST00000253794 IGKV6D-41A0A0C4DH26 115 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 RASSF10A6NK89 507 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 PRDM1O75626 825 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 AKR1B1P15121 316 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
VPS25-201ENST00000253794 MCCP23508 829 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 NOVP48745 357 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 ANAPC15P60006 121 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 TMEM179Q6ZVK1 233 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 ZNF444Q8N0Y2 327 aaPredicted RBP16.7■□□□□ 0.26
VPS25-201ENST00000253794 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.7■□□□□ 0.26
VPS25-201ENST00000253794 TCP11L1Q9NUJ3 509 aa16.7■□□□□ 0.26
VPS25-201ENST00000253794 MYH8P13535 1937 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 SPDYE5A6NIY4 337 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 KRT32Q14532 448 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 ERO1BQ86YB8 467 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 ESR2Q92731 530 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 SNX14Q9Y5W7 946 aa16.69■□□□□ 0.26
VPS25-201ENST00000253794 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 GDF11O95390 407 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 GH2P01242 217 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 PTPRAP18433 802 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 PPATQ06203 517 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 TRDNQ13061 729 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 MB21D2Q8IYB1 491 aaPredicted RBP16.68■□□□□ 0.26
VPS25-201ENST00000253794 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 MTA3Q9BTC8 594 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 PICK1Q9NRD5 415 aa16.68■□□□□ 0.26
VPS25-201ENST00000253794 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
VPS25-201ENST00000253794 HSPA6P17066 643 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 TFAP4Q01664 338 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 PPIL2Q13356 520 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
VPS25-201ENST00000253794 PPP4R3BQ5MIZ7 849 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 RGMBQ6NW40 437 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 NKX2-3Q8TAU0 364 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 SLC10A4Q96EP9 437 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 KANSL2Q9H9L4 492 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 SYNPO2Q9UMS6 1093 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
VPS25-201ENST00000253794 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
VPS25-201ENST00000253794 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
VPS25-201ENST00000253794 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
VPS25-201ENST00000253794 KDM4AO75164 1064 aa16.66■□□□□ 0.26
VPS25-201ENST00000253794 RBM25P49756 843 aaKnown RBP16.66■□□□□ 0.26
VPS25-201ENST00000253794 CCDC178Q5BJE1 867 aa16.66■□□□□ 0.26
VPS25-201ENST00000253794 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
VPS25-201ENST00000253794 RASAL3Q86YV0 1011 aa16.66■□□□□ 0.26
VPS25-201ENST00000253794 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
VPS25-201ENST00000253794 ABT1Q9ULW3 272 aaKnown RBP16.66■□□□□ 0.26
VPS25-201ENST00000253794 KCNH4Q9UQ05 1017 aa16.66■□□□□ 0.26
VPS25-201ENST00000253794 B4E1Z4 1266 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 SLC10A3P09131 477 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
VPS25-201ENST00000253794 SEPT2Q15019 361 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 ADCK5Q3MIX3 580 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 FAM47AQ5JRC9 791 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 SIAH1Q8IUQ4 282 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 ANKS1AQ92625 1134 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 CCDC102AQ96A19 550 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 WNK4Q96J92 1243 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 AS3MTQ9HBK9 375 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms