RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TRMT44Q8IYL2 757 aaKnown RBP20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 MAP3K14Q99558 947 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 TEX2Q8IWB9 1127 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 SLC4A9Q96Q91 983 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 RREB1Q92766 1687 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 CTAGE15A4D2H0 777 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 CTAGE8P0CG41 777 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 MEX3CQ5U5Q3 659 aaKnown RBP20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 CTAGE6Q86UF2 777 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 SUGP1Q8IWZ8 645 aaKnown RBP20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 CTAGE4Q8IX94 777 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 AIFM3Q96NN9 605 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 NAA15Q9BXJ9 866 aaKnown RBP20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 DEF6Q9H4E7 631 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 M0R2C6 588 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 SLC35F6Q8N357 371 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 TUBBP07437 444 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 WHAMMP3Q1A5X7 153 aa20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 RABL6Q3YEC7 729 aaPredicted RBP20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 SAMSN1Q9NSI8 373 aaKnown RBP20.1■□□□□ 0.81
CDKN1B-201ENST00000228872 A0A087WZG4 1122 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 A0A1B0GTH6 734 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 RNF113AO15541 343 aaKnown RBP20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 RNF40O75150 1001 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 HAND2P61296 217 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 TTLL7Q6ZT98 887 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 RASGRP2Q7LDG7 609 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 MB21D2Q8IYB1 491 aaPredicted RBP20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 MLKLQ8NB16 471 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 MED15Q96RN5 788 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 ALG1Q9BT22 464 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 ATRNO75882 1429 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 CYP19A1P11511 503 aaPredicted RBP20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 TADA2BQ86TJ2 420 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 ELOA2Q8IYF1 753 aaPredicted RBP20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 AFAP1L1Q8TED9 768 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 DACH1Q9UI36 760 aa20.09■□□□□ 0.81
CDKN1B-201ENST00000228872 ANTXR2P58335 489 aa20.08■□□□□ 0.81
CDKN1B-201ENST00000228872 RBL2Q08999 1139 aa20.08■□□□□ 0.81
CDKN1B-201ENST00000228872 ZNF827Q17R98 1081 aa20.08■□□□□ 0.81
CDKN1B-201ENST00000228872 TICAM2Q86XR7 235 aa20.08■□□□□ 0.81
CDKN1B-201ENST00000228872 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.81
CDKN1B-201ENST00000228872 CHRM1P11229 460 aaPredicted RBP20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 SART3Q15020 963 aaKnown RBP20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 POSTNQ15063 836 aa20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 DNAJC21Q5F1R6 531 aaKnown RBP20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 KRT40Q6A162 431 aa20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 MMS22LQ6ZRQ5 1243 aa20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 NOA1Q8NC60 698 aaKnown RBP20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 NAPGQ99747 312 aaPredicted RBP20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.08■□□□□ 0.8
CDKN1B-201ENST00000228872 A0A087WUV0 522 aaPredicted RBP20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 TEX33O43247 280 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 SYF2O95926 243 aaKnown RBP20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 PRR29P0C7W0 189 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 AARSP49588 968 aaKnown RBP eCLIP20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 WDR93Q6P2C0 686 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 PPFIBP1Q86W92 1011 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 CDC5LQ99459 802 aaKnown RBP20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 VIPAS39Q9H9C1 493 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 HOOK1Q9UJC3 728 aaKnown RBP20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 NHSQ6T4R5 1651 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 AFF2P51816 1311 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 COL5A3P25940 1745 aaPredicted RBP20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 ANKRD36CQ5JPF3 1778 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 PRPF6O94906 941 aaKnown RBP20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 MORC3Q14149 939 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 TTC39AQ5SRH9 613 aa20.07■□□□□ 0.8
CDKN1B-201ENST00000228872 NT5DC1Q5TFE4 455 aa20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 IGSF22Q8N9C0 903 aa20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 SARSP49591 514 aaKnown RBP20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 IMMTQ16891 758 aaKnown RBP20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 MCTP2Q6DN12 878 aa20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 CPLX3Q8WVH0 158 aa20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 OSBP2Q969R2 916 aa20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 GJD4Q96KN9 370 aaPredicted RBP20.06■□□□□ 0.8
CDKN1B-201ENST00000228872 FOXP2O15409 715 aa20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 CASP7P55210 303 aa20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 SPECC1Q5M775 1068 aa20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 APTXQ7Z2E3 356 aaKnown RBP20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 CTCFLQ8NI51 663 aaPredicted RBP20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 TTF2Q9UNY4 1162 aaKnown RBP20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 MFAP3LO75121 409 aa20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 SWT1Q5T5J6 900 aaKnown RBP20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 SLC9C2Q5TAH2 1124 aa20.05■□□□□ 0.8
CDKN1B-201ENST00000228872 MICALL1Q8N3F8 863 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 KRI1Q8N9T8 703 aaKnown RBP20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 ACRBPQ8NEB7 543 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 TAOK2Q9UL54 1235 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 MAP3K15Q6ZN16 1313 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 ABL1P00519 1130 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 PBX1P40424 430 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 PLCD1P51178 756 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 E2F4Q16254 413 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 ZBTB3Q9H5J0 574 aa20.04■□□□□ 0.8
CDKN1B-201ENST00000228872 ZMYM6O95789 1325 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 TRIML1Q8N9V2 468 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms