RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 LEMD3Q9Y2U8 911 aa20.87■□□□□ 0.93
SLC22A4-201ENST00000200652 AFF2P51816 1311 aa20.87■□□□□ 0.93
SLC22A4-201ENST00000200652 RBM6P78332 1123 aaKnown RBP20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 FUT2Q10981 343 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 DPCR1Q3MIW9 517 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 SPTY2D1Q68D10 685 aaPredicted RBP20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 AOPEPQ8N6M6 819 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 KIAA1551Q9HCM1 1747 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 TROAPQ12815 778 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 SBK1Q52WX2 424 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 SEPT12Q8IYM1 358 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 BCL11BQ9C0K0 894 aaPredicted RBP20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 CLIP2Q9UDT6 1046 aa20.86■□□□□ 0.93
SLC22A4-201ENST00000200652 CYP2D6P10635 497 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 NR5A1Q13285 461 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 ZRSR1Q15695 479 aaKnown RBP20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 PKN1Q16512 942 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 RILPL1Q5EBL4 403 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 DZIP1Q86YF9 867 aaKnown RBP20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 ARPP21Q9UBL0 812 aaPredicted RBP20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 ADRA2BP18089 450 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 NLRP12P59046 1061 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 AKAP17AQ02040 695 aaKnown RBP20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 PRR5LQ6MZQ0 368 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 OXER1Q8TDS5 423 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 SHISA4Q96DD7 197 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 MRFAP1L1Q96HT8 127 aa20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 RBM28Q9NW13 759 aaKnown RBP20.85■□□□□ 0.93
SLC22A4-201ENST00000200652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 PRPF3O43395 683 aaKnown RBP20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 PLEKHA8P1O95397 391 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 CALM1P0DP23 149 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 CALM2P0DP24 149 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 CALM3P0DP25 149 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 KRI1Q8N9T8 703 aaKnown RBP20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 BPIFA3Q9BQP9 254 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 XDHP47989 1333 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 BIN1O00499 593 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 WDR66Q8TBY9 1149 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
SLC22A4-201ENST00000200652 NMT2O60551 498 aa20.83■□□□□ 0.93
SLC22A4-201ENST00000200652 DDAH1O94760 285 aa20.83■□□□□ 0.93
SLC22A4-201ENST00000200652 FAM47AQ5JRC9 791 aa20.83■□□□□ 0.93
SLC22A4-201ENST00000200652 LDHBP07195 334 aaKnown RBP20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 VPS54Q9P1Q0 977 aa20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 TUBE1Q9UJT0 475 aa20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 PCDHB6Q9Y5E3 794 aa20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 V9GY48 417 aaPredicted RBP20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 CCDC144BQ3MJ40 725 aa20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 DNTTIP2Q5QJE6 756 aaKnown RBP20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 MCM9Q9NXL9 1143 aa20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 FBXO2Q9UK22 296 aaPredicted RBP20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 KCNH3Q9ULD8 1083 aa20.82■□□□□ 0.92
SLC22A4-201ENST00000200652 hCG_1642624A0A1W2PR95 340 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 IGSF3O75054 1194 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 XBP1P17861 261 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 PTPREP23469 700 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 PDE4BQ07343 736 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 LRMPQ12912 555 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 PHF20Q9BVI0 1012 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 CABP5Q9NP86 173 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 MKRN1Q9UHC7 482 aaKnown RBP20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 TRPC5Q9UL62 973 aaPredicted RBP20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 USP17L8P0C7I0 530 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 GYS1P13807 737 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 LONRF3Q496Y0 759 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 C15orf52Q6ZUT6 534 aaKnown RBP20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 TMTC3Q6ZXV5 915 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 CERKQ8TCT0 537 aa20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 RPGRQ92834 1020 aaKnown RBP20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 GPR101Q96P66 508 aaPredicted RBP20.81■□□□□ 0.92
SLC22A4-201ENST00000200652 GRIN1Q05586 938 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 GRIK5Q16478 980 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 SPECC1Q5M775 1068 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 KRBA2Q6ZNG9 492 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 ZNF804AQ7Z570 1209 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 GPSM2P81274 684 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 PNOCQ13519 176 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 CRY2Q49AN0 593 aa20.8■□□□□ 0.92
SLC22A4-201ENST00000200652 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
SLC22A4-201ENST00000200652 ISM2Q6H9L7 571 aa20.79■□□□□ 0.92
SLC22A4-201ENST00000200652 METTL16Q86W50 562 aaKnown RBP20.79■□□□□ 0.92
SLC22A4-201ENST00000200652 SH3RF3Q8TEJ3 882 aaPredicted RBP20.79■□□□□ 0.92
SLC22A4-201ENST00000200652 CACTINQ8WUQ7 758 aaKnown RBP20.79■□□□□ 0.92
SLC22A4-201ENST00000200652 TSPY2A6NKD2 308 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 SERPINB2P05120 415 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 ATP2B1P20020 1258 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 KRT2P35908 639 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 SLC4A8Q2Y0W8 1093 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 CNNM3Q8NE01 707 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 CTCFLQ8NI51 663 aaPredicted RBP20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 CEP131Q9UPN4 1083 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 CNTNAP5Q8WYK1 1306 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 FAM205CA6NFA0 338 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 USP5P45974 858 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 GSTO1P78417 241 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 NCAPHQ15003 741 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 DIXDC1Q155Q3 683 aa20.78■□□□□ 0.92
SLC22A4-201ENST00000200652 RCSD1Q6JBY9 416 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms