RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 VPS33BQ9H267 617 aa22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 ISY1Q9ULR0 285 aaKnown RBP22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 PCDHAC2Q9Y5I4 1007 aa22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 MKNK2Q9HBH9 465 aa22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 ORC3Q9UBD5 711 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 C16orf86Q6ZW13 317 aa22.96■■□□□ 1.27
TNFRSF1A-201ENST00000162749 GRPEL1Q9HAV7 217 aa22.96■■□□□ 1.27
TNFRSF1A-201ENST00000162749 SERPINA10Q9UK55 444 aa22.96■■□□□ 1.27
TNFRSF1A-201ENST00000162749 BAZ2BQ9UIF8 2168 aaKnown RBP22.96■■□□□ 1.27
TNFRSF1A-201ENST00000162749 CDKL5O76039 1030 aa22.96■■□□□ 1.27
TNFRSF1A-201ENST00000162749 TFAP4Q01664 338 aa22.95■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CPLX2Q6PUV4 134 aaKnown RBP22.95■■□□□ 1.26
TNFRSF1A-201ENST00000162749 GDPD2Q9HCC8 539 aa22.95■■□□□ 1.26
TNFRSF1A-201ENST00000162749 ARFGEF1Q9Y6D6 1849 aa22.95■■□□□ 1.26
TNFRSF1A-201ENST00000162749 RASA1P20936 1047 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 FOSBP53539 338 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 DNM1Q05193 864 aaKnown RBP22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 RTN1Q16799 776 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 PHKBQ93100 1093 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 ZNF287Q9HBT7 754 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CNPY2Q9Y2B0 182 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 RAD17O75943 681 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 IARSP41252 1262 aaKnown RBP22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CDK8P49336 464 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 RBM5P52756 815 aaKnown RBP eCLIP22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 NFIAQ12857 509 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 FANCBQ8NB91 859 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 NUP133Q8WUM0 1156 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 IL17RBQ9NRM6 502 aa22.94■■□□□ 1.26
TNFRSF1A-201ENST00000162749 TROAPQ12815 778 aa22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 RCSD1Q6JBY9 416 aa22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 SIPA1L1O43166 1804 aa22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 MYO3BQ8WXR4 1341 aa22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 PSMD14O00487 310 aa22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 FAM173BQ6P4H8 233 aa22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 RSBN1LQ6PCB5 846 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 ZNF444Q8N0Y2 327 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 OSBPL5Q9H0X9 879 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 TAOK3Q9H2K8 898 aa22.93■■□□□ 1.26
TNFRSF1A-201ENST00000162749 VIL1P09327 827 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 TSPY3P0CV98 308 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 TSPY8P0CW00 308 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 IFNAR1P17181 557 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 RESTQ13127 1097 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CATIPQ7Z7H3 387 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CCDC196A0A1B0GTZ2 297 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 GUCY1B3Q02153 619 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 TTC6Q86TZ1 520 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 NIM1KQ8IY84 436 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 ZNRF3Q9ULT6 936 aa22.92■■□□□ 1.26
TNFRSF1A-201ENST00000162749 NFKBIEO00221 500 aa22.91■■□□□ 1.26
TNFRSF1A-201ENST00000162749 GABPAQ06546 454 aa22.91■■□□□ 1.26
TNFRSF1A-201ENST00000162749 PPP2R5BQ15173 497 aa22.91■■□□□ 1.26
TNFRSF1A-201ENST00000162749 TMEM87AQ8NBN3 555 aa22.91■■□□□ 1.26
TNFRSF1A-201ENST00000162749 C8orf76Q96K31 380 aa22.91■■□□□ 1.26
TNFRSF1A-201ENST00000162749 BCS1LQ9Y276 419 aa22.91■■□□□ 1.26
TNFRSF1A-201ENST00000162749 NCLP19338 710 aaKnown RBP22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CACNB3P54284 484 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 USP48Q86UV5 1035 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 FBXO18Q8NFZ0 1043 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 GMLQ99445 158 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 ZSCAN16Q9H4T2 348 aaPredicted RBP22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 TCP11L1Q9NUJ3 509 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 STK36Q9NRP7 1315 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 DDAH1O94760 285 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 DGKHQ86XP1 1220 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 GPT2Q8TD30 523 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 GJB4Q9NTQ9 266 aa22.9■■□□□ 1.26
TNFRSF1A-201ENST00000162749 FIBPO43427 364 aa22.89■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CFAP100Q494V2 611 aa22.89■■□□□ 1.26
TNFRSF1A-201ENST00000162749 CMTR1Q8N1G2 835 aaKnown RBP22.89■■□□□ 1.26
TNFRSF1A-201ENST00000162749 AIFM3Q96NN9 605 aa22.89■■□□□ 1.26
TNFRSF1A-201ENST00000162749 IDI2Q9BXS1 227 aa22.89■■□□□ 1.26
TNFRSF1A-201ENST00000162749 UBE2Q2LH0YL09 131 aa22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 FMNL1O95466 1100 aaPredicted RBP22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CALM1P0DP23 149 aa22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CALM2P0DP24 149 aa22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CALM3P0DP25 149 aa22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 OTUD7BQ6GQQ9 843 aa22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 NBPF11Q86T75 865 aa22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SLC26A6Q9BXS9 759 aa22.89■■□□□ 1.25
TNFRSF1A-201ENST00000162749 ZFPM1Q8IX07 1006 aa22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 ANKS1AQ92625 1134 aa22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 FAM198AQ9UFP1 575 aa22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SERPINB13Q9UIV8 391 aa22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 ZBTB12Q9Y330 459 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SSRP1Q08945 709 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CAVIN1Q6NZI2 390 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CCDC82Q8N4S0 544 aa22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CRACR2BQ8N4Y2 399 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 NLGN2Q8NFZ4 835 aa22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 PRMT6Q96LA8 375 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 ALG1Q9BT22 464 aa22.88■■□□□ 1.25
TNFRSF1A-201ENST00000162749 KRT85P78386 507 aa22.87■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CCDC178Q5BJE1 867 aa22.87■■□□□ 1.25
TNFRSF1A-201ENST00000162749 RGS22Q8NE09 1264 aa22.87■■□□□ 1.25
TNFRSF1A-201ENST00000162749 NEDD1Q8NHV4 660 aa22.87■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CXCL9Q07325 125 aa22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 TCP10Q12799 353 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms