RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C URA10P30402 227 aa8.51□□□□□ -1.05
SRP54YPR088C ISF1P32488 338 aa8.51□□□□□ -1.05
SRP54YPR088C PEX5P35056 612 aa8.51□□□□□ -1.05
SRP54YPR088C RAD26P40352 1085 aa8.51□□□□□ -1.05
SRP54YPR088C DPH1P40487 425 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C DSN1P40568 576 aa8.51□□□□□ -1.05
SRP54YPR088C ROK1P45818 564 aaPredicted RBP8.51□□□□□ -1.05
SRP54YPR088C DLD2P46681 530 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C SLT2Q00772 484 aa8.51□□□□□ -1.05
SRP54YPR088C SLU7Q02775 382 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C FAR8Q05040 523 aa8.51□□□□□ -1.05
SRP54YPR088C VHS3Q08438 674 aa8.51□□□□□ -1.05
SRP54YPR088C AFI1Q99222 893 aa8.51□□□□□ -1.05
SRP54YPR088C GPA2P10823 449 aa8.51□□□□□ -1.05
SRP54YPR088C HSP60P19882 572 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C PSE1P32337 1089 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C HEM12P32347 362 aaPredicted RBP8.51□□□□□ -1.05
SRP54YPR088C ATG12P38316 186 aa8.51□□□□□ -1.05
SRP54YPR088C REV7P38927 245 aa8.51□□□□□ -1.05
SRP54YPR088C BST1P43571 1029 aa8.51□□□□□ -1.05
SRP54YPR088C TAN1P53072 289 aaPredicted RBP8.51□□□□□ -1.05
SRP54YPR088C LSC1P53598 329 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C TRM112P53738 135 aaPredicted RBP8.51□□□□□ -1.05
SRP54YPR088C MET14Q02196 202 aa8.51□□□□□ -1.05
SRP54YPR088C RLI1Q03195 608 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C ADI1Q03677 179 aa8.51□□□□□ -1.05
SRP54YPR088C TDA5Q06417 326 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C APE1P14904 514 aa8.5□□□□□ -1.05
SRP54YPR088C MET22P32179 357 aa8.5□□□□□ -1.05
SRP54YPR088C NDI1P32340 513 aa8.5□□□□□ -1.05
SRP54YPR088C MRS6P32864 603 aaKnown RBP8.5□□□□□ -1.05
SRP54YPR088C SRP101P32916 621 aa8.5□□□□□ -1.05
SRP54YPR088C ETR1P38071 380 aa8.5□□□□□ -1.05
SRP54YPR088C KTR7P40504 517 aa8.5□□□□□ -1.05
SRP54YPR088C PRP24P49960 444 aaKnown RBP8.5□□□□□ -1.05
SRP54YPR088C COQ6P53318 479 aa8.5□□□□□ -1.05
SRP54YPR088C MRS2Q01926 470 aa8.5□□□□□ -1.05
SRP54YPR088C YET3Q07451 203 aa8.5□□□□□ -1.05
SRP54YPR088C YLR012CQ07927 99 aa8.5□□□□□ -1.05
SRP54YPR088C SGE1P33335 543 aa8.49□□□□□ -1.05
SRP54YPR088C SQT1P35184 431 aa8.49□□□□□ -1.05
SRP54YPR088C CAB3P36076 571 aa8.49□□□□□ -1.05
SRP54YPR088C KTR4P38131 464 aa8.49□□□□□ -1.05
SRP54YPR088C SRP68P38687 599 aaKnown RBP8.49□□□□□ -1.05
SRP54YPR088C ELO3P40319 345 aa8.49□□□□□ -1.05
SRP54YPR088C YIL161WP40449 235 aaKnown RBP8.49□□□□□ -1.05
SRP54YPR088C RRN7P40992 514 aa8.49□□□□□ -1.05
SRP54YPR088C YFL012WP43580 148 aa8.49□□□□□ -1.05
SRP54YPR088C YOR387CQ08910 206 aa8.49□□□□□ -1.05
SRP54YPR088C LDB17Q12342 491 aa8.49□□□□□ -1.05
SRP54YPR088C COX5AP00424 153 aa8.48□□□□□ -1.05
SRP54YPR088C SSC1P0CS90 654 aaKnown RBP8.48□□□□□ -1.05
SRP54YPR088C AMS1P22855 1083 aa8.48□□□□□ -1.05
SRP54YPR088C PEX34P25584 144 aa8.48□□□□□ -1.05
SRP54YPR088C YCL068CP25593 260 aa8.48□□□□□ -1.05
SRP54YPR088C SMI1P32566 505 aa8.48□□□□□ -1.05
SRP54YPR088C SLD2P34252 453 aa8.48□□□□□ -1.05
SRP54YPR088C ADD66P36040 267 aa8.48□□□□□ -1.05
SRP54YPR088C GND2P53319 492 aa8.48□□□□□ -1.05
SRP54YPR088C DOS2P54858 310 aa8.48□□□□□ -1.05
SRP54YPR088C RTN1Q04947 295 aaKnown RBP8.48□□□□□ -1.05
SRP54YPR088C PGC1Q08959 321 aa8.48□□□□□ -1.05
SRP54YPR088C OCA6Q12454 224 aa8.48□□□□□ -1.05
SRP54YPR088C PPH22P23595 377 aa8.47□□□□□ -1.05
SRP54YPR088C LOS1P33418 1100 aaPredicted RBP8.47□□□□□ -1.05
SRP54YPR088C YHL041WP38730 149 aa8.47□□□□□ -1.05
SRP54YPR088C PEX28P38848 579 aa8.47□□□□□ -1.05
SRP54YPR088C TRF5P48561 642 aaKnown RBP8.47□□□□□ -1.05
SRP54YPR088C SIW14P53965 281 aa8.47□□□□□ -1.05
SRP54YPR088C RPN4Q03465 531 aa8.47□□□□□ -1.05
SRP54YPR088C BUD22Q04347 519 aaKnown RBP8.47□□□□□ -1.05
SRP54YPR088C CDC10P25342 322 aaKnown RBP8.47□□□□□ -1.05
SRP54YPR088C KAR9P32526 644 aa8.47□□□□□ -1.05
SRP54YPR088C MOB1P40484 314 aa8.47□□□□□ -1.05
SRP54YPR088C LSB6P42951 607 aa8.47□□□□□ -1.05
SRP54YPR088C ASN2P49090 572 aaKnown RBP8.47□□□□□ -1.05
SRP54YPR088C TEP1P53916 434 aa8.47□□□□□ -1.05
SRP54YPR088C CDC14Q00684 551 aa8.47□□□□□ -1.05
SRP54YPR088C TOF2Q02208 771 aa8.47□□□□□ -1.05
SRP54YPR088C YCS4Q06156 1176 aa8.47□□□□□ -1.05
SRP54YPR088C YLR053CQ12026 108 aa8.47□□□□□ -1.05
SRP54YPR088C COQ8P27697 501 aa8.46□□□□□ -1.06
SRP54YPR088C SSP120P39931 234 aaKnown RBP8.46□□□□□ -1.06
SRP54YPR088C IST3P40565 148 aaPredicted RBP8.46□□□□□ -1.06
SRP54YPR088C TFG1P41895 735 aaPredicted RBP8.46□□□□□ -1.06
SRP54YPR088C LIA1P47120 325 aaKnown RBP8.46□□□□□ -1.06
SRP54YPR088C BIO4P53630 237 aa8.46□□□□□ -1.06
SRP54YPR088C YPL014WQ02606 381 aa8.46□□□□□ -1.06
SRP54YPR088C NSE5Q03718 556 aa8.46□□□□□ -1.06
SRP54YPR088C LDB18Q07887 179 aa8.46□□□□□ -1.06
SRP54YPR088C INO1P11986 533 aa8.45□□□□□ -1.06
SRP54YPR088C TGL4P36165 910 aa8.45□□□□□ -1.06
SRP54YPR088C MRPL40P36534 297 aa8.45□□□□□ -1.06
SRP54YPR088C YBR032WP38223 100 aa8.45□□□□□ -1.06
SRP54YPR088C GDT1P38301 280 aaPredicted RBP8.45□□□□□ -1.06
SRP54YPR088C LIN1P38852 340 aaPredicted RBP8.45□□□□□ -1.06
SRP54YPR088C TDA10P42938 290 aa8.45□□□□□ -1.06
SRP54YPR088C STR3P53101 465 aaKnown RBP8.45□□□□□ -1.06
SRP54YPR088C HST2P53686 357 aa8.45□□□□□ -1.06
SRP54YPR088C YNR063WP53749 607 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms