RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 KRT32Q14532 448 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 RASA3Q14644 834 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 ADGRA1Q86SQ6 560 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 USP48Q86UV5 1035 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 AIDAQ96BJ3 306 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
PHGDH-224ENST00000641711 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 ISY1Q9ULR0 285 aaKnown RBP12.13□□□□□ -0.47
PHGDH-224ENST00000641711 CNTNAP1P78357 1384 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 FSD2A1L4K1 749 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 ADM5C9JUS6 153 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 APLP1P51693 650 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 DCAF15Q66K64 600 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 GIMAP6Q6P9H5 292 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 HHIPL1Q96JK4 782 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 DSCC1Q9BVC3 393 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 ATP8A2Q9NTI2 1148 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 FAM198AQ9UFP1 575 aa12.12□□□□□ -0.47
PHGDH-224ENST00000641711 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-224ENST00000641711 FLT1P17948 1338 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
PHGDH-224ENST00000641711 OTOFQ9HC10 1997 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 SSC5DA1L4H1 1573 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 TMEM88BA6NKF7 163 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 TCP10L2B9ZVM9 353 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 HSPA6P17066 643 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 NFIAQ12857 509 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 MAP3K11Q16584 847 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 KLHL40Q2TBA0 621 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 L1TD1Q5T7N2 865 aaKnown RBP12.11□□□□□ -0.47
PHGDH-224ENST00000641711 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-224ENST00000641711 TEPSINQ96N21 525 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-224ENST00000641711 MYH8P13535 1937 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
PHGDH-224ENST00000641711 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
PHGDH-224ENST00000641711 GPAA1O43292 621 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 PPP1R12BO60237 982 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-224ENST00000641711 MBD4O95243 580 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 CELF2O95319 508 aaKnown RBP12.1□□□□□ -0.47
PHGDH-224ENST00000641711 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
PHGDH-224ENST00000641711 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 C2orf69Q8N8R5 385 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 MIGA1Q8NAN2 632 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 OSBP2Q969R2 916 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-224ENST00000641711 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
PHGDH-224ENST00000641711 DOCK1Q14185 1865 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 TRAF5O00463 557 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 TBC1D12O60347 775 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 HLA-DOAP06340 250 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 USP5P45974 858 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 CACNB3P54284 484 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
PHGDH-224ENST00000641711 MAP3K10Q02779 954 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 NOL8Q76FK4 1167 aaKnown RBP12.09□□□□□ -0.47
PHGDH-224ENST00000641711 TTC6Q86TZ1 520 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 AMOTL1Q8IY63 956 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 STRBPQ96SI9 672 aaKnown RBP12.09□□□□□ -0.47
PHGDH-224ENST00000641711 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 PUS7LQ9H0K6 701 aaKnown RBP12.09□□□□□ -0.47
PHGDH-224ENST00000641711 EHD4Q9H223 541 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
PHGDH-224ENST00000641711 MKRN1Q9UHC7 482 aaKnown RBP12.09□□□□□ -0.47
PHGDH-224ENST00000641711 HERC5Q9UII4 1024 aaKnown RBP12.09□□□□□ -0.47
PHGDH-224ENST00000641711 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
PHGDH-224ENST00000641711 CPA1P15085 419 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
PHGDH-224ENST00000641711 PICALMQ13492 652 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 MCTP1Q6DN14 999 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
PHGDH-224ENST00000641711 CSRNP1Q96S65 589 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
PHGDH-224ENST00000641711 NACAP1Q9BZK3 213 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 ARMT1Q9H993 441 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 DCP1AQ9NPI6 582 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-224ENST00000641711 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-224ENST00000641711 TLL2Q9Y6L7 1015 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 THSD7BQ9C0I4 1608 aa12.08□□□□□ -0.48
PHGDH-224ENST00000641711 ATAD5Q96QE3 1844 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 GOLGA6L3A6NEY3 463 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
PHGDH-224ENST00000641711 TCP10Q12799 353 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 ME3Q16798 604 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 NBPF12Q5TAG4 269 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-224ENST00000641711 CST9Q5W186 159 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 CCDC129Q6ZRS4 1044 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 SAPCD2Q86UD0 394 aa12.07□□□□□ -0.48
PHGDH-224ENST00000641711 FOXP4Q8IVH2 680 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms