RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 TMEM39BQ9GZU3 492 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 IL25Q9H293 177 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 EPB41L4AQ9HCS5 686 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-218ENST00000641491 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
PHGDH-218ENST00000641491 FAM198AQ9UFP1 575 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 SERPINB13Q9UIV8 391 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 PASKQ96RG2 1323 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 VEGFBP49765 207 aa15.34■□□□□ 0.05
PHGDH-218ENST00000641491 LBX1P52954 281 aa15.34■□□□□ 0.05
PHGDH-218ENST00000641491 HIRAP54198 1017 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-218ENST00000641491 SBK1Q52WX2 424 aa15.34■□□□□ 0.05
PHGDH-218ENST00000641491 CTR9Q6PD62 1173 aa15.34■□□□□ 0.05
PHGDH-218ENST00000641491 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-218ENST00000641491 ABHD8Q96I13 439 aa15.34■□□□□ 0.05
PHGDH-218ENST00000641491 USP26Q9BXU7 913 aa15.34■□□□□ 0.05
PHGDH-218ENST00000641491 KRT23Q9C075 422 aa15.34■□□□□ 0.05
PHGDH-218ENST00000641491 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.34■□□□□ 0.052e-7■■■■□ 19.6
PHGDH-218ENST00000641491 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
PHGDH-218ENST00000641491 ZNF646O15015 1829 aaPredicted RBP15.33■□□□□ 0.05
PHGDH-218ENST00000641491 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.05
PHGDH-218ENST00000641491 ERICH2A1L162 156 aa15.33■□□□□ 0.04
PHGDH-218ENST00000641491 TMEM88BA6NKF7 163 aa15.33■□□□□ 0.04
PHGDH-218ENST00000641491 SLC27A2O14975 620 aa15.33■□□□□ 0.04
PHGDH-218ENST00000641491 PPP1R12BO60237 982 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-218ENST00000641491 NT5C2P49902 561 aa15.33■□□□□ 0.04
PHGDH-218ENST00000641491 SART3Q15020 963 aaKnown RBP15.33■□□□□ 0.04
PHGDH-218ENST00000641491 C12orf60Q5U649 245 aa15.33■□□□□ 0.04
PHGDH-218ENST00000641491 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
PHGDH-218ENST00000641491 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-218ENST00000641491 ZNF408Q9H9D4 720 aa15.33■□□□□ 0.04
PHGDH-218ENST00000641491 ASTN2O75129 1339 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-218ENST00000641491 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-218ENST00000641491 ADAMTSL1Q8N6G6 1762 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
PHGDH-218ENST00000641491 HMGB1P09429 215 aaKnown RBP15.32■□□□□ 0.04
PHGDH-218ENST00000641491 HSPA4P34932 840 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 ANAPC15P60006 121 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 CTDSPL2Q05D32 466 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 PPP4R3BQ5MIZ7 849 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 AKNAD1Q5T1N1 836 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 ESR2Q92731 530 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 EHD4Q9H223 541 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 CABP5Q9NP86 173 aa15.32■□□□□ 0.04
PHGDH-218ENST00000641491 CYP2D7A0A087X1C5 515 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 ADM5C9JUS6 153 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 RANBP6O60518 1105 aaKnown RBP15.31■□□□□ 0.04
PHGDH-218ENST00000641491 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 CYP2D6P10635 497 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 IREB2P48200 963 aaKnown RBP15.31■□□□□ 0.04
PHGDH-218ENST00000641491 MAP1SQ66K74 1059 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-218ENST00000641491 ZNF341Q9BYN7 854 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 SCAF8Q9UPN6 1271 aaKnown RBP15.31■□□□□ 0.04
PHGDH-218ENST00000641491 ATRNL1Q5VV63 1379 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 NAV1Q8NEY1 1877 aa15.31■□□□□ 0.04
PHGDH-218ENST00000641491 DDTLA6NHG4 134 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-218ENST00000641491 SEC24BO95487 1268 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 ITGBL1O95965 494 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-218ENST00000641491 CYP21A2P08686 494 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 RGS19P49795 217 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 BLOC1S2Q6QNY1 142 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 ARMC9Q7Z3E5 817 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 JAKMIP1Q96N16 626 aaKnown RBP15.3■□□□□ 0.04
PHGDH-218ENST00000641491 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 GLIS2Q9BZE0 524 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-218ENST00000641491 ANAPC4Q9UJX5 808 aa15.3■□□□□ 0.04
PHGDH-218ENST00000641491 HSPA8P11142 646 aaKnown RBP15.29■□□□□ 0.04
PHGDH-218ENST00000641491 PLCD1P51178 756 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-218ENST00000641491 NECTIN1Q15223 517 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-218ENST00000641491 CCDC178Q5BJE1 867 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 C16orf86Q6ZW13 317 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 CDCA5Q96FF9 252 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 CSADQ9Y600 493 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
PHGDH-218ENST00000641491 ROBO3Q96MS0 1386 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 E7EWF7 191 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 PRDM1O75626 825 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
PHGDH-218ENST00000641491 CDK8P49336 464 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 MAP2K1Q02750 393 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-218ENST00000641491 PRKG1Q13976 671 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 NBPF12Q5TAG4 269 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-218ENST00000641491 MIGA2Q7L4E1 593 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 DYNLL2Q96FJ2 89 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 CCDC17Q96LX7 622 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
PHGDH-218ENST00000641491 RASSF10A6NK89 507 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 FOXP2O15409 715 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 ST18O60284 1047 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 872.3 ms