RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TXKP42681 527 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 PAK2Q13177 524 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 CABS1Q96KC9 395 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 METTL22Q9BUU2 404 aaPredicted RBP20.63■□□□□ 0.89
SCARB2-213ENST00000638680 ERCC5P28715 1186 aaPredicted RBP20.63■□□□□ 0.89
SCARB2-213ENST00000638680 IL13P35225 146 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 GBP1P32455 592 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 PPFIA1Q13136 1202 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 LMNTD2Q8IXW0 634 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 UBL4BQ8N7F7 174 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 KIFAP3Q92845 792 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 BLMP54132 1417 aaPredicted RBP20.62■□□□□ 0.89
SCARB2-213ENST00000638680 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 MKRN1Q9UHC7 482 aaKnown RBP20.62■□□□□ 0.89
SCARB2-213ENST00000638680 CALUO43852 315 aaPredicted RBP20.62■□□□□ 0.89
SCARB2-213ENST00000638680 GSPT1P15170 499 aaKnown RBP20.62■□□□□ 0.89
SCARB2-213ENST00000638680 ERCC3P19447 782 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 CTDSPL2Q05D32 466 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 NEDD9Q14511 834 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 GPCPD1Q9NPB8 672 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 KCNJ14Q9UNX9 436 aa20.62■□□□□ 0.89
SCARB2-213ENST00000638680 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
SCARB2-213ENST00000638680 ERCC6LQ2NKX8 1250 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 GPT2Q8TD30 523 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 BLZF1Q9H2G9 400 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 E7EVH7 732 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 PPM1FP49593 454 aaPredicted RBP20.61■□□□□ 0.89
SCARB2-213ENST00000638680 TPD52P55327 224 aaPredicted RBP20.61■□□□□ 0.89
SCARB2-213ENST00000638680 ZSCAN26Q16670 478 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 FAM89AQ96GI7 184 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
SCARB2-213ENST00000638680 NYXQ9GZU5 481 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 AGTPBP1Q9UPW5 1226 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 NR1I2O75469 434 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 LRMPQ12912 555 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 CACNA2D3Q8IZS8 1091 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 SUCLG2Q96I99 432 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 CSRNP2Q9H175 543 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 ITGA6P23229 1130 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 NCKAP5LQ9HCH0 1330 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 SF3A3Q12874 501 aaKnown RBP eCLIP20.61■□□□□ 0.89
SCARB2-213ENST00000638680 CFAP221Q4G0U5 840 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 PNMA8AQ86V59 439 aaPredicted RBP20.61■□□□□ 0.89
SCARB2-213ENST00000638680 KBTBD3Q8NAB2 608 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 MAP3K19Q56UN5 1328 aa20.61■□□□□ 0.89
SCARB2-213ENST00000638680 PKD2L1Q9P0L9 805 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 WWC3Q9ULE0 1092 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 DENND2AQ9ULE3 1009 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 PKP1Q13835 747 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 ZNF365Q70YC5 407 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 STAMQ92783 540 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 CHL1O00533 1208 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 CETN3O15182 167 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 TAOK1Q7L7X3 1001 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 PLBD2Q8NHP8 589 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 CCDC110Q8TBZ0 833 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 PLEKHA4Q9H4M7 779 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 HDAC9Q9UKV0 1011 aa20.6■□□□□ 0.89
SCARB2-213ENST00000638680 MRPS9P82933 396 aaKnown RBP20.59■□□□□ 0.89
SCARB2-213ENST00000638680 SERTAD1Q9UHV2 236 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 PRDM1O75626 825 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 WDR44Q5JSH3 913 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 CADPS2Q86UW7 1296 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 ANKRD2Q9GZV1 360 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCARB2-213ENST00000638680 CHMP2AO43633 222 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 ZNF131P52739 623 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 BRD3Q15059 726 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 CEP128Q6ZU80 1094 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 MRPL12P52815 198 aaKnown RBP20.59■□□□□ 0.89
SCARB2-213ENST00000638680 BIRC3Q13489 604 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 PPP1R12CQ9BZL4 782 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 IL2RBP14784 551 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 CLUL1Q15846 466 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 GKAP1Q5VSY0 366 aaPredicted RBP20.59■□□□□ 0.89
SCARB2-213ENST00000638680 DYMQ7RTS9 669 aa20.59■□□□□ 0.89
SCARB2-213ENST00000638680 VGLL3A8MV65 326 aa20.58■□□□□ 0.89
SCARB2-213ENST00000638680 NSFL1CQ9UNZ2 370 aaKnown RBP20.58■□□□□ 0.89
SCARB2-213ENST00000638680 CCDC14Q49A88 953 aa20.58■□□□□ 0.89
SCARB2-213ENST00000638680 VSIG1Q86XK7 387 aa20.58■□□□□ 0.89
SCARB2-213ENST00000638680 CABLES1Q8TDN4 633 aa20.58■□□□□ 0.89
SCARB2-213ENST00000638680 UHRF1BP1LA0JNW5 1464 aa20.58■□□□□ 0.89
SCARB2-213ENST00000638680 A2MP01023 1474 aa20.58■□□□□ 0.89
SCARB2-213ENST00000638680 E7EWF7 191 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 SP4Q02446 784 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 PUM3Q15397 648 aaKnown RBP20.58■□□□□ 0.88
SCARB2-213ENST00000638680 TYW1BQ6NUM6 668 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 CPSF2Q9P2I0 782 aaKnown RBP20.58■□□□□ 0.88
SCARB2-213ENST00000638680 TSKSQ9UJT2 592 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 PPP1R21Q6ZMI0 780 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 DESI2Q9BSY9 194 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 KIAA1468Q9P260 1216 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 ZNF215Q9UL58 517 aaPredicted RBP20.58■□□□□ 0.88
SCARB2-213ENST00000638680 ADALQ6DHV7 355 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 GAS2L3Q86XJ1 694 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 TM6SF1Q9BZW5 370 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 SAR1BQ9Y6B6 198 aa20.58■□□□□ 0.88
SCARB2-213ENST00000638680 PFKFB1P16118 471 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 ARHGEF2Q92974 986 aaKnown RBP20.57■□□□□ 0.88
SCARB2-213ENST00000638680 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms