RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZC3H18Q86VM9 953 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 MYLK4Q86YV6 388 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 PHKBQ93100 1093 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 SMARCAL1Q9NZC9 954 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 CEP131Q9UPN4 1083 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 MAP3K2Q9Y2U5 619 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 NFE2L3Q9Y4A8 694 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 HDGFP51858 240 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ANAPC15P60006 121 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 MAP3K9P80192 1104 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 FAM207AQ9NSI2 230 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 UBAP1Q9NZ09 502 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 NOX5Q96PH1 765 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 WDR91A4D1P6 747 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 NAA35Q5VZE5 725 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 CTAGE1Q96RT6 745 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 AP1M1Q9BXS5 423 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 CABP5Q9NP86 173 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 BAZ1AQ9NRL2 1556 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 KRT14P02533 472 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 HIPK4Q8NE63 616 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 MYD88Q99836 296 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 LZTS1Q9Y250 596 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 NCK2O43639 380 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 SUPT3HO75486 399 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 KRT9P35527 623 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 RAB3IPQ96QF0 476 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 SYNRGQ9UMZ2 1314 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ATP5J2-PTCD1G3V325 749 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 PTCD1O75127 700 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 UBTFL6P0CB48 400 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 NBPF14Q5TI25 921 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 CYTH2Q99418 400 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ZNF446Q9NWS9 450 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ZNF185O15231 689 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 CTIFO43310 598 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 HMGB1P09429 215 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 CASP14P31944 242 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 SERPINB6P35237 376 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 EHHADHQ08426 723 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 PAK2Q13177 524 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ADCK5Q3MIX3 580 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 DENND2CQ68D51 928 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 LONP2Q86WA8 852 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 IFIH1Q9BYX4 1025 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 PALMDQ9NP74 551 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 TTC41PQ6P2S7 1318 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 TADA3O75528 432 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 HAUS1Q96CS2 278 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 NFU1Q9UMS0 254 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 TTF2Q9UNY4 1162 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 FCHSD2O94868 740 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CDC25BP30305 580 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 RASSF7Q02833 373 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 BEND6Q5SZJ8 279 aaPredicted RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 TDRD7Q8NHU6 1098 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 ZKSCAN3Q9BRR0 538 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CARD14Q9BXL6 1004 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 SERTAD1Q9UHV2 236 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 HFM1A2PYH4 1435 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 KRIT1O00522 736 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 KCNK3O14649 394 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 IARSP41252 1262 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 TAOK3Q9H2K8 898 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 RASAL2Q9UJF2 1139 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 NAIPQ13075 1403 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 PLA2G4DQ86XP0 818 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 UNC5CLQ8IV45 518 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 SCOCQ9UIL1 159 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 NOVA2Q9UNW9 492 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CHMP2BQ9UQN3 213 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 PHLPP2Q6ZVD8 1323 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CMTR1Q8N1G2 835 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CDC23Q9UJX2 597 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 AGRPO00253 132 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 RGS16O15492 202 aaPredicted RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CCNHP51946 323 aaPredicted RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CYP27A1Q02318 531 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 HHATQ5VTY9 493 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 SCYL3Q8IZE3 742 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 RABGAP1Q9Y3P9 1069 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 RANBP6O60518 1105 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 DDX17Q92841 729 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 GOLPH3LQ9H4A5 285 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 UTP11Q9Y3A2 253 aaKnown RBP5.6□□□□□ -1.51
VPS13D-214ENST00000620676 KCNJ14Q9UNX9 436 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 G3V3G9 751 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 MSH2P43246 934 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 DCAF8Q5TAQ9 597 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 GNAT1P11488 350 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 TMEM132AQ24JP5 1023 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 RRAGAQ7L523 313 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 VPS36Q86VN1 386 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 CNGA4Q8IV77 575 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 EPB41L5Q9HCM4 733 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 TTC14Q96N46 770 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 LARGE1O95461 756 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 ATP8B2P98198 1209 aa5.6□□□□□ -1.51
VPS13D-214ENST00000620676 MTF1Q14872 753 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms