RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TMEM87AQ8NBN3 555 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 LGR6Q9HBX8 967 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 KBTBD4Q9NVX7 518 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 LEMD3Q9Y2U8 911 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 FAM170BA6NMN3 283 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 F6X3S4 739 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 CDK8P49336 464 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 CDK5R2Q13319 367 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 ARTNQ5T4W7 220 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 DUSP27Q5VZP5 1158 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 CDC37L1Q7L3B6 337 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 GATAD2BQ8WXI9 593 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 BACH2Q9BYV9 841 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 METTL5Q9NRN9 209 aaKnown RBP8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 GGT7Q9UJ14 662 aa8.64□□□□□ -1.03
SCAMP1-205ENST00000614488 KIAA1324LA8MWY0 1029 aaPredicted RBP8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 CILPO75339 1184 aa8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 FOSL1P15407 271 aa8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 CAP2P40123 477 aa8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 CYP27C1Q4G0S4 372 aa8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 ZNF765Q7L2R6 523 aa8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 JARID2Q92833 1246 aaPredicted RBP8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 KCNQ5Q9NR82 932 aa8.63□□□□□ -1.03
SCAMP1-205ENST00000614488 FAM221AA4D161 298 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 BPNT1O95861 308 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 RECKO95980 971 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 FAM87AP0C7U9 286 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 GARTP22102 1010 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 ZNF76P36508 570 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 ETF1P62495 437 aaKnown RBP8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 SNAP47Q5SQN1 464 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 BNC2Q6ZN30 1099 aaPredicted RBP8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 UBE3DQ7Z6J8 389 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 Q8N3U1 123 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 COPRSQ9NQ92 184 aa8.62□□□□□ -1.03
SCAMP1-205ENST00000614488 LRIG2O94898 1065 aa8.61□□□□□ -1.03
SCAMP1-205ENST00000614488 F13A1P00488 732 aa8.61□□□□□ -1.03
SCAMP1-205ENST00000614488 GRK4P32298 578 aa8.61□□□□□ -1.03
SCAMP1-205ENST00000614488 PDE4BQ07343 736 aa8.61□□□□□ -1.03
SCAMP1-205ENST00000614488 HID1Q8IV36 788 aa8.61□□□□□ -1.03
SCAMP1-205ENST00000614488 DUSP23Q9BVJ7 150 aa8.61□□□□□ -1.03
SCAMP1-205ENST00000614488 ZFP64Q9NPA5 681 aa8.61□□□□□ -1.03
SCAMP1-205ENST00000614488 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 CYP26A1O43174 497 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 HYAL3O43820 417 aaPredicted RBP8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 SPINK2P20155 84 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 SSTR4P31391 388 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 FANCCQ00597 558 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 MPP2Q14168 576 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 ARMCX6Q7L4S7 300 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 GOLM1Q8NBJ4 401 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 MRRFQ96E11 262 aaKnown RBP8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 FBRSQ9HAH7 460 aa8.6□□□□□ -1.03
SCAMP1-205ENST00000614488 EIF4A3P38919 411 aaKnown RBP8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 SLBPQ14493 270 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 MSMPQ1L6U9 139 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 FAM196AQ6ZSG2 479 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 TOP6BLQ8N6T0 577 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 LRRC3Q9BY71 257 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 PRDM10Q9NQV6 1147 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 PCMTD2Q9NV79 361 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 ADAM30Q9UKF2 790 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 SUPT16HQ9Y5B9 1047 aaKnown RBP8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 ROBO2Q9HCK4 1378 aa8.59□□□□□ -1.03
SCAMP1-205ENST00000614488 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
SCAMP1-205ENST00000614488 MED26O95402 600 aa8.58□□□□□ -1.04
SCAMP1-205ENST00000614488 PGRP06401 933 aa8.58□□□□□ -1.04
SCAMP1-205ENST00000614488 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
SCAMP1-205ENST00000614488 DTX1Q86Y01 620 aa8.58□□□□□ -1.04
SCAMP1-205ENST00000614488 FOXQ1Q9C009 403 aa8.58□□□□□ -1.04
SCAMP1-205ENST00000614488 GREM1O60565 184 aa8.57□□□□□ -1.04
SCAMP1-205ENST00000614488 LEFTY1O75610 366 aa8.57□□□□□ -1.04
SCAMP1-205ENST00000614488 NKG7Q16617 165 aa8.57□□□□□ -1.04
SCAMP1-205ENST00000614488 FBXL19Q6PCT2 694 aa8.57□□□□□ -1.04
SCAMP1-205ENST00000614488 MRPL41Q8IXM3 137 aaKnown RBP8.57□□□□□ -1.04
SCAMP1-205ENST00000614488 MFSD2AQ8NA29 543 aa8.57□□□□□ -1.04
SCAMP1-205ENST00000614488 RNF34Q969K3 372 aa8.57□□□□□ -1.04
SCAMP1-205ENST00000614488 PRR36Q9H6K5 1346 aa8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 CST3P01034 146 aaPredicted RBP8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 SLC6A19Q695T7 634 aa8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 REC114Q7Z4M0 266 aa8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 MKNK2Q9HBH9 465 aa8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 LRRC4CQ9HCJ2 640 aa8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 KIAA1522Q9P206 1035 aaPredicted RBP8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 ADAMTS1Q9UHI8 967 aa8.56□□□□□ -1.04
SCAMP1-205ENST00000614488 CWF19L2Q2TBE0 894 aaKnown RBP8.55□□□□□ -1.04
SCAMP1-205ENST00000614488 TMEM201Q5SNT2 666 aa8.55□□□□□ -1.04
SCAMP1-205ENST00000614488 ZNF296Q8WUU4 475 aaPredicted RBP8.55□□□□□ -1.04
SCAMP1-205ENST00000614488 TMEM87BQ96K49 555 aa8.55□□□□□ -1.04
SCAMP1-205ENST00000614488 TJP2Q9UDY2 1190 aa8.55□□□□□ -1.04
SCAMP1-205ENST00000614488 GTF2IRD1Q9UHL9 959 aa8.55□□□□□ -1.04
SCAMP1-205ENST00000614488 IGF2BP3O00425 579 aaKnown RBP eCLIP8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 PRNPP04156 253 aa8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 PRAMEF13Q5VWM6 474 aa8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 FAM214BQ7L5A3 538 aa8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 USP48Q86UV5 1035 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms