RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ATP10DQ9P241 1426 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
VPS36-207ENST00000611132 SELENOOQ9BVL4 669 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 ATP1A3P13637 1013 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 PRDM4Q9UKN5 801 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 SPAG5Q96R06 1193 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 NOSTRINQ8IVI9 506 aa16.47■□□□□ 0.23
VPS36-207ENST00000611132 PTPN21Q16825 1174 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 FAN1Q9Y2M0 1017 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 ANKRD18AQ8IVF6 992 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 SECISBP2LQ93073 1101 aaKnown RBP16.46■□□□□ 0.23
VPS36-207ENST00000611132 LRRC27Q9C0I9 530 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 QRICH2Q9H0J4 1663 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 MBD4O95243 580 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 DTHD1Q6ZMT9 781 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 CPLX4Q7Z7G2 160 aa16.46■□□□□ 0.23
VPS36-207ENST00000611132 SASH1O94885 1247 aa16.46■□□□□ 0.22
VPS36-207ENST00000611132 DCAF5Q96JK2 942 aa16.46■□□□□ 0.22
VPS36-207ENST00000611132 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.22
VPS36-207ENST00000611132 FAM204AQ9H8W3 233 aa16.46■□□□□ 0.22
VPS36-207ENST00000611132 PPP6R2O75170 966 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 PLCD1P51178 756 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 TNNC1P63316 161 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 OR8K1Q8NGG5 319 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 MYO1CO00159 1063 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 AK9Q5TCS8 1911 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 SPATA1Q5VX52 437 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 ADAM21Q9UKJ8 722 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 FERMT2Q96AC1 680 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 NUP58Q9BVL2 599 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 SETBP1Q9Y6X0 1596 aa16.45■□□□□ 0.22
VPS36-207ENST00000611132 FGAP02671 866 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
VPS36-207ENST00000611132 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
VPS36-207ENST00000611132 STAMQ92783 540 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 NOC4LQ9BVI4 516 aaKnown RBP16.44■□□□□ 0.22
VPS36-207ENST00000611132 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 ZAP70P43403 619 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 DZIP1Q86YF9 867 aaKnown RBP16.44■□□□□ 0.22
VPS36-207ENST00000611132 ANKS4BQ8N8V4 417 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 SCLT1Q96NL6 688 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 HAUS4Q9H6D7 363 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 EFCC1Q9HA90 598 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 ZMYM6O95789 1325 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 IQCB1Q15051 598 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 PROSER3Q2NL68 480 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 GLI2P10070 1586 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 KIF23Q02241 960 aaPredicted RBP16.44■□□□□ 0.22
VPS36-207ENST00000611132 ZMYM1Q5SVZ6 1142 aa16.44■□□□□ 0.22
VPS36-207ENST00000611132 GNAQP50148 359 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 TTC38Q5R3I4 469 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 BCAS4Q8TDM0 211 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
VPS36-207ENST00000611132 RAD51AP2Q09MP3 1159 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 CHRNA2Q15822 529 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 NELFBQ8WX92 580 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 PLIN2Q99541 437 aa16.43■□□□□ 0.22
VPS36-207ENST00000611132 ERCC5P28715 1186 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 HPDP32754 393 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 LIG3P49916 1009 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 ARID5AQ03989 594 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 KIAA0753Q2KHM9 967 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 CCDC155Q8N6L0 562 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 ZNF496Q96IT1 587 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 BTBD18B2RXH4 712 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 GNGT1P63211 74 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 IRX5P78411 483 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 CCZ1BP86790 482 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 FMR1NBQ8N0W7 255 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 RGS22Q8NE09 1264 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 NSRP1Q9H0G5 558 aaKnown RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 ZCCHC17Q9NP64 241 aaKnown RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 TBX22Q9Y458 520 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 MAP2K2P36507 400 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 DHX40Q8IX18 779 aaKnown RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
VPS36-207ENST00000611132 CASP14P31944 242 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 PPP1R2P41236 205 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 MYO1AQ9UBC5 1043 aa16.42■□□□□ 0.22
VPS36-207ENST00000611132 GYS2P54840 703 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms