RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, human

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSPG5-205	ENST00000610462	QTRT2	Q9H974	415 aa	Known RBP	32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	XDH	P47989	1333 aa		32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	IGSF3	O75054	1194 aa		32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	CAVIN2	O95810	425 aa		32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	GYS1	P13807	737 aa		32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	SLC27A3	Q5K4L6	730 aa		32.52	■■■□□ 2.8
CSPG5-205	ENST00000610462	NBPF11	Q86T75	865 aa		32.51	■■■□□ 2.8
CSPG5-205	ENST00000610462	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	32.51	■■■□□ 2.8
CSPG5-205	ENST00000610462	ATP8A2	Q9NTI2	1148 aa		32.51	■■■□□ 2.8
CSPG5-205	ENST00000610462	MYH6	P13533	1939 aa		32.51	■■■□□ 2.79
CSPG5-205	ENST00000610462	USP17L12	C9JPN9	530 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	USP17L21	D6R901	530 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	SLC39A14	Q15043	492 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	PPP2R5B	Q15173	497 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	LUZP1	Q86V48	1076 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	BRWD3	Q6RI45	1802 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	UBE2Q2L	H0YL09	131 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	ZNF500	O60304	480 aa	Predicted RBP	32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	PLCB2	Q00722	1185 aa		32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	DCP1A	Q9NPI6	582 aa	Predicted RBP	32.5	■■■□□ 2.79
CSPG5-205	ENST00000610462	NUP133	Q8WUM0	1156 aa		32.49	■■■□□ 2.79
CSPG5-205	ENST00000610462	RPGR	Q92834	1020 aa	Known RBP	32.49	■■■□□ 2.79
CSPG5-205	ENST00000610462		A0A1B0GVL5	298 aa		32.49	■■■□□ 2.79
CSPG5-205	ENST00000610462	ENAH	Q8N8S7	591 aa	Predicted RBP	32.49	■■■□□ 2.79
CSPG5-205	ENST00000610462	WDR66	Q8TBY9	1149 aa		32.49	■■■□□ 2.79
CSPG5-205	ENST00000610462	DNAJC25	Q9H1X3	360 aa		32.49	■■■□□ 2.79
CSPG5-205	ENST00000610462	DEXI	O95424	95 aa		32.48	■■■□□ 2.79
CSPG5-205	ENST00000610462	GUCY1A2	P33402	732 aa		32.48	■■■□□ 2.79
CSPG5-205	ENST00000610462	C15orf52	Q6ZUT6	534 aa	Known RBP	32.48	■■■□□ 2.79
CSPG5-205	ENST00000610462	DZIP1	Q86YF9	867 aa	Known RBP	32.48	■■■□□ 2.79
CSPG5-205	ENST00000610462	TDRD7	Q8NHU6	1098 aa	Known RBP	32.48	■■■□□ 2.79
CSPG5-205	ENST00000610462	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
CSPG5-205	ENST00000610462	NDUFA8	P51970	172 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	ST5	P78524	1137 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	CRY2	Q49AN0	593 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	SLC51A	Q86UW1	340 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	TAOK2	Q9UL54	1235 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	JAG2	Q9Y219	1238 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	SERPINB2	P05120	415 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	ZNF165	P49910	485 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	SBK1	Q52WX2	424 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	AXDND1	Q5T1B0	1012 aa	Predicted RBP	32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	IQCA1	Q86XH1	822 aa		32.47	■■■□□ 2.79
CSPG5-205	ENST00000610462	ORC4	O43929	436 aa		32.46	■■■□□ 2.79
CSPG5-205	ENST00000610462	STX1A	Q16623	288 aa		32.46	■■■□□ 2.79
CSPG5-205	ENST00000610462	ARPP21	Q9UBL0	812 aa	Predicted RBP	32.46	■■■□□ 2.79
CSPG5-205	ENST00000610462	PPP6R2	O75170	966 aa		32.46	■■■□□ 2.79
CSPG5-205	ENST00000610462	MMP1	P03956	469 aa		32.46	■■■□□ 2.79
CSPG5-205	ENST00000610462	ZNF804A	Q7Z570	1209 aa		32.46	■■■□□ 2.79
CSPG5-205	ENST00000610462	PRDM1	O75626	825 aa		32.45	■■■□□ 2.79
CSPG5-205	ENST00000610462	CMA1	P23946	247 aa		32.45	■■■□□ 2.79
CSPG5-205	ENST00000610462	IFIT1B	Q5T764	474 aa	Known RBP	32.45	■■■□□ 2.79
CSPG5-205	ENST00000610462	MAP3K14	Q99558	947 aa		32.45	■■■□□ 2.79
CSPG5-205	ENST00000610462	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	32.45	■■■□□ 2.79
CSPG5-205	ENST00000610462	LDHB	P07195	334 aa	Known RBP	32.44	■■■□□ 2.78
CSPG5-205	ENST00000610462	PTPA	Q15257	358 aa		32.44	■■■□□ 2.78
CSPG5-205	ENST00000610462	SAFB	Q15424	915 aa	Known RBP eCLIP	32.44	■■■□□ 2.78
CSPG5-205	ENST00000610462	SLC3A2	P08195	630 aa	Known RBP	32.44	■■■□□ 2.78
CSPG5-205	ENST00000610462	CATIP	Q7Z7H3	387 aa		32.43	■■■□□ 2.78
CSPG5-205	ENST00000610462	CMTR1	Q8N1G2	835 aa	Known RBP	32.43	■■■□□ 2.78
CSPG5-205	ENST00000610462	JMY	Q8N9B5	988 aa		32.43	■■■□□ 2.78
CSPG5-205	ENST00000610462	RNF26	Q9BY78	433 aa	Predicted RBP	32.43	■■■□□ 2.78
CSPG5-205	ENST00000610462	WDHD1	O75717	1129 aa	Predicted RBP	32.42	■■■□□ 2.78
CSPG5-205	ENST00000610462	GPSM2	P81274	684 aa		32.42	■■■□□ 2.78
CSPG5-205	ENST00000610462	KRT27	Q7Z3Y8	459 aa		32.42	■■■□□ 2.78
CSPG5-205	ENST00000610462	NOSTRIN	Q8IVI9	506 aa		32.42	■■■□□ 2.78
CSPG5-205	ENST00000610462	CCDC82	Q8N4S0	544 aa		32.42	■■■□□ 2.78
CSPG5-205	ENST00000610462	RBM17	Q96I25	401 aa	Known RBP	32.42	■■■□□ 2.78
CSPG5-205	ENST00000610462	SDF4	Q9BRK5	362 aa		32.42	■■■□□ 2.78
CSPG5-205	ENST00000610462	CALM1	P0DP23	149 aa		32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	CALM2	P0DP24	149 aa		32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	CALM3	P0DP25	149 aa		32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	MARCKS	P29966	332 aa	Predicted RBP	32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	FOXP1	Q9H334	677 aa	Predicted RBP	32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	GSTO1	P78417	241 aa		32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	EVX2	Q03828	476 aa		32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	DIS3L2	Q8IYB7	885 aa	Known RBP	32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	RBM28	Q9NW13	759 aa	Known RBP	32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	ANO10	Q9NW15	660 aa		32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	KCNJ14	Q9UNX9	436 aa		32.41	■■■□□ 2.78
CSPG5-205	ENST00000610462	BTBD18	B2RXH4	712 aa		32.4	■■■□□ 2.78
CSPG5-205	ENST00000610462	TRIM37	O94972	964 aa		32.4	■■■□□ 2.78
CSPG5-205	ENST00000610462	ATP2B4	P23634	1241 aa		32.4	■■■□□ 2.78
CSPG5-205	ENST00000610462	CYP2D6	P10635	497 aa		32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	PFKFB1	P16118	471 aa		32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	IQCB1	Q15051	598 aa		32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	C11orf57	Q6ZUT1	292 aa	Predicted RBP	32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	DDAH1	O94760	285 aa		32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	ZNF202	O95125	648 aa		32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	PDE4B	Q07343	736 aa		32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	NAP1L5	Q96NT1	182 aa	Predicted RBP	32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	GPR101	Q96P66	508 aa	Predicted RBP	32.39	■■■□□ 2.78
CSPG5-205	ENST00000610462	MROH7-TTC4	A0A0A0MT08	1334 aa		32.38	■■■□□ 2.77
CSPG5-205	ENST00000610462	TROAP	Q12815	778 aa		32.38	■■■□□ 2.77
CSPG5-205	ENST00000610462	AKAP17A	Q02040	695 aa	Known RBP	32.38	■■■□□ 2.77
CSPG5-205	ENST00000610462	MPND	Q8N594	471 aa		32.38	■■■□□ 2.77
CSPG5-205	ENST00000610462	BBOX1	O75936	387 aa		32.37	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms