RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.45■□□□□ 0.38
TUBE1-208ENST00000604743 DHX36Q9H2U1 1008 aaKnown RBP17.45■□□□□ 0.38
TUBE1-208ENST00000604743 PI4KBQ9UBF8 816 aa17.45■□□□□ 0.38
TUBE1-208ENST00000604743 GPR25O00155 361 aa17.44■□□□□ 0.38
TUBE1-208ENST00000604743 TBC1D12O60347 775 aa17.44■□□□□ 0.38
TUBE1-208ENST00000604743 CTNND1O60716 968 aaKnown RBP17.44■□□□□ 0.38
TUBE1-208ENST00000604743 CETPP11597 493 aa17.44■□□□□ 0.38
TUBE1-208ENST00000604743 HDAC1Q13547 482 aaPredicted RBP17.44■□□□□ 0.38
TUBE1-208ENST00000604743 CRACR2BQ8N4Y2 399 aaPredicted RBP17.44■□□□□ 0.38
TUBE1-208ENST00000604743 ZNF296Q8WUU4 475 aaPredicted RBP17.44■□□□□ 0.38
TUBE1-208ENST00000604743 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
TUBE1-208ENST00000604743 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.44■□□□□ 0.38
TUBE1-208ENST00000604743 ZHX2Q9Y6X8 837 aa17.44■□□□□ 0.38
TUBE1-208ENST00000604743 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
TUBE1-208ENST00000604743 TCRBV5S4A2TA0A5A2 114 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 CHGBP05060 677 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 HLA-DOAP06340 250 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 PTPRAP18433 802 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 ADD2P35612 726 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 DGKZQ13574 1117 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 AAMPQ13685 434 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 CCDC84Q86UT8 332 aaPredicted RBP17.43■□□□□ 0.38
TUBE1-208ENST00000604743 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 GCC1Q96CN9 775 aa17.43■□□□□ 0.38
TUBE1-208ENST00000604743 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
TUBE1-208ENST00000604743 CRHR2Q13324 411 aa17.42■□□□□ 0.38
TUBE1-208ENST00000604743 TAF1CQ15572 869 aaPredicted RBP17.42■□□□□ 0.38
TUBE1-208ENST00000604743 LCORLQ8N3X6 602 aa17.42■□□□□ 0.38
TUBE1-208ENST00000604743 CRNKL1Q9BZJ0 848 aaKnown RBP17.42■□□□□ 0.38
TUBE1-208ENST00000604743 RWDD1Q9H446 243 aaPredicted RBP17.42■□□□□ 0.38
TUBE1-208ENST00000604743 ARMT1Q9H993 441 aa17.42■□□□□ 0.38
TUBE1-208ENST00000604743 HERC5Q9UII4 1024 aaKnown RBP17.42■□□□□ 0.38
TUBE1-208ENST00000604743 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
TUBE1-208ENST00000604743 BTBD19C9JJ37 291 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 FKTNO75072 461 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 MBD4O95243 580 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 RRP1BQ14684 758 aaKnown RBP17.41■□□□□ 0.38
TUBE1-208ENST00000604743 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 FOXP4Q8IVH2 680 aaPredicted RBP17.41■□□□□ 0.38
TUBE1-208ENST00000604743 CFHR5Q9BXR6 569 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 MCOLN1Q9GZU1 580 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 KCNH4Q9UQ05 1017 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 TTC41PQ6P2S7 1318 aa17.41■□□□□ 0.38
TUBE1-208ENST00000604743 ERC2O15083 957 aa17.4■□□□□ 0.38
TUBE1-208ENST00000604743 POLR3DP05423 398 aaPredicted RBP17.4■□□□□ 0.38
TUBE1-208ENST00000604743 MX1P20591 662 aa17.4■□□□□ 0.38
TUBE1-208ENST00000604743 CAP2P40123 477 aa17.4■□□□□ 0.38
TUBE1-208ENST00000604743 SDR42E1Q8WUS8 393 aa17.4■□□□□ 0.38
TUBE1-208ENST00000604743 PTPRFP10586 1907 aa17.4■□□□□ 0.38
TUBE1-208ENST00000604743 TRIM75PA6NK02 468 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 CXCL11O14625 94 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 PRKAB2O43741 272 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 GDF11O95390 407 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 IGHDP01880 384 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 UBE3CQ15386 1083 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
TUBE1-208ENST00000604743 TTC6Q86TZ1 520 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 KBTBD3Q8NAB2 608 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 DNAJC18Q9H819 358 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 ZFYVE28Q9HCC9 887 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 MCM9Q9NXL9 1143 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 AFG3L2Q9Y4W6 797 aa17.39■□□□□ 0.37
TUBE1-208ENST00000604743 GLRX3O76003 335 aaKnown RBP17.38■□□□□ 0.37
TUBE1-208ENST00000604743 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
TUBE1-208ENST00000604743 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
TUBE1-208ENST00000604743 ABHD8Q96I13 439 aa17.38■□□□□ 0.37
TUBE1-208ENST00000604743 LNPKQ9C0E8 428 aa17.38■□□□□ 0.37
TUBE1-208ENST00000604743 PUS7LQ9H0K6 701 aaKnown RBP17.38■□□□□ 0.37
TUBE1-208ENST00000604743 PDHXO00330 501 aa17.37■□□□□ 0.37
TUBE1-208ENST00000604743 PLCD1P51178 756 aa17.37■□□□□ 0.37
TUBE1-208ENST00000604743 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
TUBE1-208ENST00000604743 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
TUBE1-208ENST00000604743 METTL16Q86W50 562 aaKnown RBP17.37■□□□□ 0.37
TUBE1-208ENST00000604743 DCP1AQ9NPI6 582 aaPredicted RBP17.37■□□□□ 0.37
TUBE1-208ENST00000604743 SERPINB13Q9UIV8 391 aa17.37■□□□□ 0.37
TUBE1-208ENST00000604743 SLC4A4Q9Y6R1 1079 aa17.37■□□□□ 0.37
TUBE1-208ENST00000604743 MYH8P13535 1937 aa17.37■□□□□ 0.37
TUBE1-208ENST00000604743 DDX60LQ5H9U9 1706 aaKnown RBP17.36■□□□□ 0.37
TUBE1-208ENST00000604743 A0A0G2JLL6 359 aaPredicted RBP17.36■□□□□ 0.37
TUBE1-208ENST00000604743 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
TUBE1-208ENST00000604743 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
TUBE1-208ENST00000604743 JAG1P78504 1218 aa17.36■□□□□ 0.37
TUBE1-208ENST00000604743 SPP2Q13103 211 aa17.36■□□□□ 0.37
TUBE1-208ENST00000604743 MOGSQ13724 837 aa17.36■□□□□ 0.37
TUBE1-208ENST00000604743 PRRT2Q7Z6L0 340 aaPredicted RBP17.36■□□□□ 0.37
TUBE1-208ENST00000604743 ANKRD23Q86SG2 305 aa17.36■□□□□ 0.37
TUBE1-208ENST00000604743 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
TUBE1-208ENST00000604743 ECM2O94769 699 aaPredicted RBP17.35■□□□□ 0.37
TUBE1-208ENST00000604743 CYP2D6P10635 497 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 SP3Q02447 781 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 EVX2Q03828 476 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 FASTKD5Q7L8L6 764 aaKnown RBP17.35■□□□□ 0.37
TUBE1-208ENST00000604743 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 ZNF280CQ8ND82 737 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 CD99L2Q8TCZ2 262 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 AS3MTQ9HBK9 375 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 ZCCHC17Q9NP64 241 aaKnown RBP17.35■□□□□ 0.37
TUBE1-208ENST00000604743 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
TUBE1-208ENST00000604743 CCDC85CA6NKD9 419 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms