RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TCP10L2B9ZVM9 353 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 ORC4O43929 436 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 EPS15P42566 896 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 ANKRD1Q15327 319 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 EHD4Q9H223 541 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 PI4KBQ9UBF8 816 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 HACL1Q9UJ83 578 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 ATRNL1Q5VV63 1379 aa21.95■■□□□ 1.1
SSBP4-212ENST00000601919 IQCA1LA6NCM1 817 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 PLCD1P51178 756 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 FGD1P98174 961 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 RRP12Q5JTH9 1297 aaKnown RBP21.94■■□□□ 1.1
SSBP4-212ENST00000601919 APOBEC3FQ8IUX4 373 aaKnown RBP21.94■■□□□ 1.1
SSBP4-212ENST00000601919 MB21D2Q8IYB1 491 aaPredicted RBP21.94■■□□□ 1.1
SSBP4-212ENST00000601919 TRIM34Q9BYJ4 488 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 ALDH8A1Q9H2A2 487 aaPredicted RBP21.94■■□□□ 1.1
SSBP4-212ENST00000601919 MKNK2Q9HBH9 465 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 DAXXQ9UER7 740 aaPredicted RBP21.94■■□□□ 1.1
SSBP4-212ENST00000601919 SWAP70Q9UH65 585 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 SERPINB13Q9UIV8 391 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 NEDD4P46934 1319 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 MYH8P13535 1937 aa21.94■■□□□ 1.1
SSBP4-212ENST00000601919 B4E1Z4 1266 aa21.93■■□□□ 1.1
SSBP4-212ENST00000601919 EGFRP00533 1210 aa21.93■■□□□ 1.1
SSBP4-212ENST00000601919 SLC4A8Q2Y0W8 1093 aa21.93■■□□□ 1.1
SSBP4-212ENST00000601919 C16orf86Q6ZW13 317 aa21.93■■□□□ 1.1
SSBP4-212ENST00000601919 FOXP4Q8IVH2 680 aaPredicted RBP21.93■■□□□ 1.1
SSBP4-212ENST00000601919 STK11IPQ8N1F8 1099 aa21.93■■□□□ 1.1
SSBP4-212ENST00000601919 TTC14Q96N46 770 aa21.93■■□□□ 1.1
SSBP4-212ENST00000601919 MTA3Q9BTC8 594 aa21.93■■□□□ 1.1
SSBP4-212ENST00000601919 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.93■■□□□ 1.1
SSBP4-212ENST00000601919 CPA1P15085 419 aa21.92■■□□□ 1.1
SSBP4-212ENST00000601919 SART3Q15020 963 aaKnown RBP21.92■■□□□ 1.1
SSBP4-212ENST00000601919 ZNF444Q8N0Y2 327 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-212ENST00000601919 CRACR2BQ8N4Y2 399 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-212ENST00000601919 TRPM4Q8TD43 1214 aa21.92■■□□□ 1.1
SSBP4-212ENST00000601919 PRC1O43663 620 aa21.91■■□□□ 1.1
SSBP4-212ENST00000601919 RANBP6O60518 1105 aaKnown RBP21.91■■□□□ 1.1
SSBP4-212ENST00000601919 KDM4AO75164 1064 aa21.91■■□□□ 1.1
SSBP4-212ENST00000601919 EXOSC10Q01780 885 aaKnown RBP21.91■■□□□ 1.1
SSBP4-212ENST00000601919 USP50Q70EL3 339 aaPredicted RBP21.91■■□□□ 1.1
SSBP4-212ENST00000601919 ZFPM1Q8IX07 1006 aa21.91■■□□□ 1.1
SSBP4-212ENST00000601919 TMEM87BQ96K49 555 aa21.91■■□□□ 1.1
SSBP4-212ENST00000601919 WDR90Q96KV7 1748 aa21.91■■□□□ 1.1
SSBP4-212ENST00000601919 CNTNAP1P78357 1384 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 DDTLA6NHG4 134 aaPredicted RBP21.9■■□□□ 1.1
SSBP4-212ENST00000601919 CDK8P49336 464 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 IQCA1Q86XH1 822 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 FBXL16Q8N461 479 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 DYNLL2Q96FJ2 89 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 CSRNP1Q96S65 589 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 INCENPQ9NQS7 918 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 ZSWIM5Q9P217 1185 aa21.9■■□□□ 1.1
SSBP4-212ENST00000601919 SRCAPQ6ZRS2 3230 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 ERICH2A1L162 156 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 PRDM1O75626 825 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 EPHX2P34913 555 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 GABPAQ06546 454 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 CCDC178Q5BJE1 867 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 ANGEL2Q5VTE6 544 aaKnown RBP21.89■■□□□ 1.09
SSBP4-212ENST00000601919 Q6ZUG5 572 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 HOOK2Q96ED9 719 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 UBAC1Q9BSL1 405 aa21.89■■□□□ 1.09
SSBP4-212ENST00000601919 HERC5Q9UII4 1024 aaKnown RBP21.89■■□□□ 1.09
SSBP4-212ENST00000601919 TSPY2A6NKD2 308 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 SMIM22K7EJ46 135 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 K7ELQ4 463 aaPredicted RBP21.88■■□□□ 1.09
SSBP4-212ENST00000601919 AK2P54819 239 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 EVX2Q03828 476 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 RASA3Q14644 834 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 SH3BP5LQ7L8J4 393 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 PNMA8AQ86V59 439 aaPredicted RBP21.88■■□□□ 1.09
SSBP4-212ENST00000601919 IPO9Q96P70 1041 aaKnown RBP21.88■■□□□ 1.09
SSBP4-212ENST00000601919 TBC1D2Q9BYX2 928 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 LIMCH1Q9UPQ0 1083 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 PPP2R3BQ9Y5P8 575 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 TACC3Q9Y6A5 838 aa21.88■■□□□ 1.09
SSBP4-212ENST00000601919 HIRAP54198 1017 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-212ENST00000601919 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
SSBP4-212ENST00000601919 METTL16Q86W50 562 aaKnown RBP21.87■■□□□ 1.09
SSBP4-212ENST00000601919 ZC3H15Q8WU90 426 aaKnown RBP21.87■■□□□ 1.09
SSBP4-212ENST00000601919 DCPSQ96C86 337 aaKnown RBP21.87■■□□□ 1.09
SSBP4-212ENST00000601919 ZSCAN31Q96LW9 406 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-212ENST00000601919 TCEANC2Q96MN5 208 aa21.87■■□□□ 1.09
SSBP4-212ENST00000601919 TMEM39BQ9GZU3 492 aa21.87■■□□□ 1.09
SSBP4-212ENST00000601919 DEFB129Q9H1M3 183 aa21.87■■□□□ 1.09
SSBP4-212ENST00000601919 GGA3Q9NZ52 723 aa21.87■■□□□ 1.09
SSBP4-212ENST00000601919 SIPA1L1O43166 1804 aa21.87■■□□□ 1.09
SSBP4-212ENST00000601919 IFIT3O14879 490 aaKnown RBP21.86■■□□□ 1.09
SSBP4-212ENST00000601919 TSPY3P0CV98 308 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 TSPY8P0CW00 308 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 RASA1P20936 1047 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 ANTXR2P58335 489 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 TMEM67Q5HYA8 995 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 CHST3Q7LGC8 479 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 TMTC2Q8N394 836 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 SLC44A5Q8NCS7 719 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 CCDC17Q96LX7 622 aa21.86■■□□□ 1.09
SSBP4-212ENST00000601919 AGXT2Q9BYV1 514 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms