RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 GABPAQ06546 454 aa26.9■■□□□ 1.9
SNRNP70-204ENST00000595231 SERPINB13Q9UIV8 391 aa26.9■■□□□ 1.9
SNRNP70-204ENST00000595231 FAM196BA6NMK8 535 aa26.89■■□□□ 1.9
SNRNP70-204ENST00000595231 MINDY4BA8MYZ0 360 aa26.89■■□□□ 1.9
SNRNP70-204ENST00000595231 PRKG1Q13976 671 aa26.89■■□□□ 1.9
SNRNP70-204ENST00000595231 KIAA1211Q6ZU35 1233 aa26.89■■□□□ 1.9
SNRNP70-204ENST00000595231 HERC5Q9UII4 1024 aaKnown RBP26.89■■□□□ 1.9
SNRNP70-204ENST00000595231 MOB2Q70IA6 237 aa26.89■■□□□ 1.89
SNRNP70-204ENST00000595231 AMOTL1Q8IY63 956 aa26.89■■□□□ 1.89
SNRNP70-204ENST00000595231 ANO2Q9NQ90 1003 aa26.89■■□□□ 1.89
SNRNP70-204ENST00000595231 PPP1R12BO60237 982 aaPredicted RBP26.88■■□□□ 1.89
SNRNP70-204ENST00000595231 C8orf34Q49A92 452 aa26.88■■□□□ 1.89
SNRNP70-204ENST00000595231 DCAF15Q66K64 600 aa26.88■■□□□ 1.89
SNRNP70-204ENST00000595231 DYNLL2Q96FJ2 89 aa26.88■■□□□ 1.89
SNRNP70-204ENST00000595231 GBA2Q9HCG7 927 aaPredicted RBP26.88■■□□□ 1.89
SNRNP70-204ENST00000595231 LAMB1P07942 1786 aa26.87■■□□□ 1.89
SNRNP70-204ENST00000595231 PPARAQ07869 468 aa26.87■■□□□ 1.89
SNRNP70-204ENST00000595231 MAP3K11Q16584 847 aa26.87■■□□□ 1.89
SNRNP70-204ENST00000595231 KLRG1Q96E93 195 aa26.87■■□□□ 1.89
SNRNP70-204ENST00000595231 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.87■■□□□ 1.893e-17■□□□□ 8.1
SNRNP70-204ENST00000595231 PHF20L1A8MW92 1017 aa26.86■■□□□ 1.89
SNRNP70-204ENST00000595231 CRACR2BQ8N4Y2 399 aaPredicted RBP26.86■■□□□ 1.89
SNRNP70-204ENST00000595231 ZNF112Q9UJU3 913 aa26.86■■□□□ 1.89
SNRNP70-204ENST00000595231 ANAPC4Q9UJX5 808 aa26.86■■□□□ 1.89
SNRNP70-204ENST00000595231 ROBO3Q96MS0 1386 aa26.86■■□□□ 1.89
SNRNP70-204ENST00000595231 FKBP1BP68106 108 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 ZNF341Q9BYN7 854 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 ANGEL1Q9UNK9 670 aaKnown RBP26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 PAPPA2Q9BXP8 1791 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 C16orf86Q6ZW13 317 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 C2orf69Q8N8R5 385 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 SLC44A5Q8NCS7 719 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 NBPF3Q9H094 633 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 CTNNA3Q9UI47 895 aa26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 RBM8AQ9Y5S9 174 aaKnown RBP26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 U3KPZ7 1027 aaPredicted RBP26.85■■□□□ 1.89
SNRNP70-204ENST00000595231 RRP1BQ14684 758 aaKnown RBP26.84■■□□□ 1.89
SNRNP70-204ENST00000595231 TATDN1Q6P1N9 297 aa26.84■■□□□ 1.89
SNRNP70-204ENST00000595231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.84■■□□□ 1.897e-66■■■■□ 25.2
SNRNP70-204ENST00000595231 TMEM88BA6NKF7 163 aa26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 SHMT1P34896 483 aa26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 APLP1P51693 650 aa26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 HAND2P61296 217 aa26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 CTDSPL2Q05D32 466 aa26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 TTLL12Q14166 644 aaPredicted RBP26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 TAOK2Q9UL54 1235 aa26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 TACC3Q9Y6A5 838 aa26.83■■□□□ 1.89
SNRNP70-204ENST00000595231 UBE2Q2LH0YL09 131 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 ZNF213O14771 459 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 REC8O95072 547 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 CDK8P49336 464 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 LDLRAD1Q5T700 205 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 ARMC9Q7Z3E5 817 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 STK11IPQ8N1F8 1099 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 SWAP70Q9UH65 585 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 SEC24BO95487 1268 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 IREB2P48200 963 aaKnown RBP26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 C1QTNF8P60827 252 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 NECTIN1Q15223 517 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 WRNIP1Q96S55 665 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 TRIM34Q9BYJ4 488 aa26.82■■□□□ 1.88
SNRNP70-204ENST00000595231 LAMA4Q16363 1823 aa26.81■■□□□ 1.88
SNRNP70-204ENST00000595231 CYP21A2P08686 494 aa26.81■■□□□ 1.88
SNRNP70-204ENST00000595231 INPP5BP32019 993 aa26.81■■□□□ 1.88
SNRNP70-204ENST00000595231 IMMTQ16891 758 aaKnown RBP26.81■■□□□ 1.88
SNRNP70-204ENST00000595231 SAPCD2Q86UD0 394 aa26.81■■□□□ 1.88
SNRNP70-204ENST00000595231 ZKSCAN4Q969J2 545 aaPredicted RBP26.81■■□□□ 1.88
SNRNP70-204ENST00000595231 INCENPQ9NQS7 918 aa26.81■■□□□ 1.88
SNRNP70-204ENST00000595231 FGRP09769 529 aa26.8■■□□□ 1.88
SNRNP70-204ENST00000595231 MAP3K9P80192 1104 aa26.8■■□□□ 1.88
SNRNP70-204ENST00000595231 OTOFQ9HC10 1997 aa26.8■■□□□ 1.88
SNRNP70-204ENST00000595231 TBC1D10CQ8IV04 446 aa26.79■■□□□ 1.88
SNRNP70-204ENST00000595231 TLL2Q9Y6L7 1015 aa26.79■■□□□ 1.88
SNRNP70-204ENST00000595231 JAG1P78504 1218 aa26.79■■□□□ 1.88
SNRNP70-204ENST00000595231 ANKRD13AQ8IZ07 590 aa26.79■■□□□ 1.88
SNRNP70-204ENST00000595231 USP26Q9BXU7 913 aa26.79■■□□□ 1.88
SNRNP70-204ENST00000595231 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.79■■□□□ 1.88
SNRNP70-204ENST00000595231 TAF6LQ9Y6J9 622 aa26.79■■□□□ 1.88
SNRNP70-204ENST00000595231 EPB41L2O43491 1005 aaKnown RBP26.78■■□□□ 1.88
SNRNP70-204ENST00000595231 CTNND1O60716 968 aaKnown RBP26.78■■□□□ 1.88
SNRNP70-204ENST00000595231 SLC3A2P08195 630 aaKnown RBP26.78■■□□□ 1.88
SNRNP70-204ENST00000595231 CAP2P40123 477 aa26.78■■□□□ 1.88
SNRNP70-204ENST00000595231 CREBZFQ9NS37 354 aa26.78■■□□□ 1.88
SNRNP70-204ENST00000595231 UNCXA6NJT0 531 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 PRDM1O75626 825 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 HUNKP57058 714 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 PDE4BQ07343 736 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 VGLL4Q14135 290 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 SHROOM1Q2M3G4 852 aaPredicted RBP26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 CERKLQ49MI3 558 aaPredicted RBP26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 AKNAD1Q5T1N1 836 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 STAG1Q8WVM7 1258 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 CLMNQ96JQ2 1002 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 MYH8P13535 1937 aa26.77■■□□□ 1.88
SNRNP70-204ENST00000595231 RASA1P20936 1047 aa26.76■■□□□ 1.87
SNRNP70-204ENST00000595231 CREB3L3Q68CJ9 461 aa26.76■■□□□ 1.87
SNRNP70-204ENST00000595231 MKNK2Q9HBH9 465 aa26.76■■□□□ 1.87
SNRNP70-204ENST00000595231 SLC27A2O14975 620 aa26.76■■□□□ 1.87
SNRNP70-204ENST00000595231 NOL9Q5SY16 702 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms