RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZNF532Q9HCE3 1301 aa22.43■■□□□ 1.18
SHKBP1-202ENST00000593764 FKTNO75072 461 aa22.43■■□□□ 1.18
SHKBP1-202ENST00000593764 PICK1Q9NRD5 415 aa22.43■■□□□ 1.18
SHKBP1-202ENST00000593764 ECHDC1Q9NTX5 307 aa22.43■■□□□ 1.18
SHKBP1-202ENST00000593764 HERC5Q9UII4 1024 aaKnown RBP22.43■■□□□ 1.18
SHKBP1-202ENST00000593764 ZHX2Q9Y6X8 837 aa22.43■■□□□ 1.18
SHKBP1-202ENST00000593764 SLFNL1Q499Z3 407 aa22.42■■□□□ 1.18
SHKBP1-202ENST00000593764 CTU1Q7Z7A3 348 aaKnown RBP22.42■■□□□ 1.18
SHKBP1-202ENST00000593764 DNAJC18Q9H819 358 aa22.42■■□□□ 1.18
SHKBP1-202ENST00000593764 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.42■■□□□ 1.18
SHKBP1-202ENST00000593764 SAP30BPQ9UHR5 308 aaKnown RBP22.42■■□□□ 1.18
SHKBP1-202ENST00000593764 AFG3L2Q9Y4W6 797 aa22.42■■□□□ 1.18
SHKBP1-202ENST00000593764 SIPA1L1O43166 1804 aa22.42■■□□□ 1.18
SHKBP1-202ENST00000593764 MAGEB6P1A0A0J9YX57 407 aa22.41■■□□□ 1.18
SHKBP1-202ENST00000593764 CXCL11O14625 94 aa22.41■■□□□ 1.18
SHKBP1-202ENST00000593764 ADD2P35612 726 aa22.41■■□□□ 1.18
SHKBP1-202ENST00000593764 FOXP4Q8IVH2 680 aaPredicted RBP22.41■■□□□ 1.18
SHKBP1-202ENST00000593764 ZCCHC17Q9NP64 241 aaKnown RBP22.41■■□□□ 1.18
SHKBP1-202ENST00000593764 CHGBP05060 677 aa22.4■■□□□ 1.18
SHKBP1-202ENST00000593764 CAP2P40123 477 aa22.4■■□□□ 1.18
SHKBP1-202ENST00000593764 USP5P45974 858 aa22.4■■□□□ 1.18
SHKBP1-202ENST00000593764 HDAC1Q13547 482 aaPredicted RBP22.4■■□□□ 1.18
SHKBP1-202ENST00000593764 TAF1CQ15572 869 aaPredicted RBP22.4■■□□□ 1.18
SHKBP1-202ENST00000593764 TSHZ3Q63HK5 1081 aa22.4■■□□□ 1.18
SHKBP1-202ENST00000593764 AAMPQ13685 434 aa22.39■■□□□ 1.17
SHKBP1-202ENST00000593764 CCDC84Q86UT8 332 aaPredicted RBP22.39■■□□□ 1.17
SHKBP1-202ENST00000593764 ZFYVE28Q9HCC9 887 aa22.39■■□□□ 1.17
SHKBP1-202ENST00000593764 DOCK1Q14185 1865 aa22.39■■□□□ 1.17
SHKBP1-202ENST00000593764 A0A0G2JLL6 359 aaPredicted RBP22.38■■□□□ 1.17
SHKBP1-202ENST00000593764 SLC4A8Q2Y0W8 1093 aa22.38■■□□□ 1.17
SHKBP1-202ENST00000593764 GPAT2Q6NUI2 795 aa22.38■■□□□ 1.17
SHKBP1-202ENST00000593764 PRRT2Q7Z6L0 340 aaPredicted RBP22.38■■□□□ 1.17
SHKBP1-202ENST00000593764 ANKRD23Q86SG2 305 aa22.38■■□□□ 1.17
SHKBP1-202ENST00000593764 OTUD7AQ8TE49 926 aaPredicted RBP22.38■■□□□ 1.17
SHKBP1-202ENST00000593764 PHIPQ8WWQ0 1821 aa22.38■■□□□ 1.17
SHKBP1-202ENST00000593764 JAG1P78504 1218 aa22.37■■□□□ 1.17
SHKBP1-202ENST00000593764 CAP1Q01518 475 aa22.37■■□□□ 1.17
SHKBP1-202ENST00000593764 LCORLQ8N3X6 602 aa22.37■■□□□ 1.17
SHKBP1-202ENST00000593764 GPATCH3Q96I76 525 aa22.37■■□□□ 1.17
SHKBP1-202ENST00000593764 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.37■■□□□ 1.17
SHKBP1-202ENST00000593764 SUPT16HQ9Y5B9 1047 aaKnown RBP22.37■■□□□ 1.17
SHKBP1-202ENST00000593764 MYH1P12882 1939 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 PDHXO00330 501 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 TLR2O60603 784 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 HLA-DOAP06340 250 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 SP3Q02447 781 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 UBE3CQ15386 1083 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 CRNKL1Q9BZJ0 848 aaKnown RBP22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 HTTP42858 3142 aa22.36■■□□□ 1.17
SHKBP1-202ENST00000593764 PKN2Q16513 984 aaKnown RBP22.35■■□□□ 1.17
SHKBP1-202ENST00000593764 SHROOM1Q2M3G4 852 aaPredicted RBP22.35■■□□□ 1.17
SHKBP1-202ENST00000593764 CRACR2BQ8N4Y2 399 aaPredicted RBP22.35■■□□□ 1.17
SHKBP1-202ENST00000593764 ARMT1Q9H993 441 aa22.35■■□□□ 1.17
SHKBP1-202ENST00000593764 TTC41PQ6P2S7 1318 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 TRIM75PA6NK02 468 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 PLCD1P51178 756 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 ANKRD45Q5TZF3 282 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 FASTKD5Q7L8L6 764 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 KBTBD3Q8NAB2 608 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 CD99L2Q8TCZ2 262 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 SDR42E1Q8WUS8 393 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 GCC1Q96CN9 775 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 EHD4Q9H223 541 aa22.34■■□□□ 1.17
SHKBP1-202ENST00000593764 SALL3Q9BXA9 1300 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 USP17L5A8MUK1 530 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 PRKAB2O43741 272 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 MBD4O95243 580 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 SPP2Q13103 211 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 TATDN1Q6P1N9 297 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 OTOP1Q7RTM1 612 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 TTC6Q86TZ1 520 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 ZNF280CQ8ND82 737 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 ERO1AQ96HE7 468 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 PUS7LQ9H0K6 701 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 DCP1AQ9NPI6 582 aaPredicted RBP22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 SERPINB13Q9UIV8 391 aa22.33■■□□□ 1.17
SHKBP1-202ENST00000593764 PTPRFP10586 1907 aa22.33■■□□□ 1.16
SHKBP1-202ENST00000593764 CCDC85CA6NKD9 419 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 ASNSP08243 561 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 EVX2Q03828 476 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 ZSCAN25Q6NSZ9 544 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 C17orf99Q6UX52 265 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 TRIM34Q9BYJ4 488 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 TBC1D2Q9BYX2 928 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 MCM9Q9NXL9 1143 aa22.32■■□□□ 1.16
SHKBP1-202ENST00000593764 ADGRA2Q96PE1 1338 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 ATAD5Q96QE3 1844 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 MYH7P12883 1935 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 GDF11O95390 407 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 GABPAQ06546 454 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 GADL1Q6ZQY3 521 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 WDR18Q9BV38 432 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 GINM1Q9NU53 330 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 TRIM17Q9Y577 477 aa22.31■■□□□ 1.16
SHKBP1-202ENST00000593764 ERC2O15083 957 aa22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 GLRX3O76003 335 aaKnown RBP22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 IGHDP01880 384 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms