RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 EVX2Q03828 476 aa18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 PDE4BQ07343 736 aa18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 NBPF12Q5TAG4 269 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 CHADLQ6NUI6 762 aa18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 MFSD6Q6ZSS7 791 aa18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 GLIS2Q9BZE0 524 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 MKNK2Q9HBH9 465 aa18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 ZNF287Q9HBT7 754 aa18.43■□□□□ 0.54
PRKCSH-219ENST00000593101 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 AKNAD1Q5T1N1 836 aa18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 MIGA2Q7L4E1 593 aa18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 CDAN1Q8IWY9 1227 aa18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 KCNB2Q92953 911 aa18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 EHD4Q9H223 541 aa18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 RNF41Q9H4P4 317 aaPredicted RBP18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.42■□□□□ 0.54
PRKCSH-219ENST00000593101 KIF3CO14782 793 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 CDK8P49336 464 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 TRDNQ13061 729 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 KRT32Q14532 448 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 TSGA10IPQ3SY00 556 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 DLK2Q6UY11 383 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 C16orf86Q6ZW13 317 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 RASEFQ8IZ41 740 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 INCENPQ9NQS7 918 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 TOMM22Q9NS69 142 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 SWAP70Q9UH65 585 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 HERC5Q9UII4 1024 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 TAOK2Q9UL54 1235 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 SNX14Q9Y5W7 946 aa18.41■□□□□ 0.54
PRKCSH-219ENST00000593101 E7EWF7 191 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 TBC1D12O60347 775 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 PCP11498 1178 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 NF2P35240 595 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 RRP12Q5JTH9 1297 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 DCAF15Q66K64 600 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 TBC1D10CQ8IV04 446 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 ZNF444Q8N0Y2 327 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 STAG1Q8WVM7 1258 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 CDCA5Q96FF9 252 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 TAF6LQ9Y6J9 622 aa18.4■□□□□ 0.54
PRKCSH-219ENST00000593101 FAM196BA6NMK8 535 aa18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 PRDM1O75626 825 aa18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 ANAPC15P60006 121 aa18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 GABPAQ06546 454 aa18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 METTL16Q86W50 562 aaKnown RBP18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 KRT23Q9C075 422 aa18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 CNNM2Q9H8M5 875 aa18.39■□□□□ 0.53
PRKCSH-219ENST00000593101 DDX60LQ5H9U9 1706 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 FGRP09769 529 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 SLURP2P0DP57 97 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 PSMA5P28066 241 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 MAP3K10Q02779 954 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 SLC44A5Q8NCS7 719 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 NCOA7Q8NI08 942 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 ZNF341Q9BYN7 854 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 ROBO3Q96MS0 1386 aa18.38■□□□□ 0.53
PRKCSH-219ENST00000593101 TRAF5O00463 557 aa18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 ORC4O43929 436 aa18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 RANBP6O60518 1105 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 PRKG1Q13976 671 aa18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 CERKLQ49MI3 558 aaPredicted RBP18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 STOX1Q6ZVD7 989 aa18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 JAKMIP1Q96N16 626 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 LAMB1P07942 1786 aa18.37■□□□□ 0.53
PRKCSH-219ENST00000593101 PPP1R12BO60237 982 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 TOMM70O94826 608 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 SHMT1P34896 483 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 TTLL12Q14166 644 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 ADCK5Q3MIX3 580 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 TATDN1Q6P1N9 297 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 SMC1BQ8NDV3 1235 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 ESR2Q92731 530 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 DNAJC18Q9H819 358 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 ZNF408Q9H9D4 720 aa18.36■□□□□ 0.53
PRKCSH-219ENST00000593101 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
PRKCSH-219ENST00000593101 NEDD4P46934 1319 aa18.35■□□□□ 0.53
PRKCSH-219ENST00000593101 B4E1Z4 1266 aa18.35■□□□□ 0.53
PRKCSH-219ENST00000593101 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-219ENST00000593101 HMGB1P09429 215 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-219ENST00000593101 TFAP4Q01664 338 aa18.35■□□□□ 0.53
PRKCSH-219ENST00000593101 CCDC17Q96LX7 622 aa18.35■□□□□ 0.53
PRKCSH-219ENST00000593101 TSPY2A6NKD2 308 aa18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 MPHOSPH10O00566 681 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 KDM4AO75164 1064 aa18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 USP2O75604 605 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 RASA1P20936 1047 aa18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 NT5C2P49902 561 aa18.34■□□□□ 0.53
PRKCSH-219ENST00000593101 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms