RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.89■■□□□ 1.25
DDX39A-214ENST00000590556 HSPD1P10809 573 aaKnown RBP22.88■■□□□ 1.25
DDX39A-214ENST00000590556 PLCD1P51178 756 aa22.88■■□□□ 1.25
DDX39A-214ENST00000590556 MAP3K10Q02779 954 aa22.88■■□□□ 1.25
DDX39A-214ENST00000590556 CTR9Q6PD62 1173 aa22.88■■□□□ 1.25
DDX39A-214ENST00000590556 NAPBQ9H115 298 aa22.88■■□□□ 1.25
DDX39A-214ENST00000590556 ARPP21Q9UBL0 812 aaPredicted RBP22.88■■□□□ 1.25
DDX39A-214ENST00000590556 HERC5Q9UII4 1024 aaKnown RBP22.88■■□□□ 1.25
DDX39A-214ENST00000590556 CYP2D7A0A087X1C5 515 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 FAM196BA6NMK8 535 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 FOXP2O15409 715 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 SGSM2O43147 1006 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 SLURP2P0DP57 97 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 SBK1Q52WX2 424 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 C12orf60Q5U649 245 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 KLRG1Q96E93 195 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 EHD4Q9H223 541 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 IL25Q9H293 177 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 SERPINB13Q9UIV8 391 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 SIPA1L1O43166 1804 aa22.87■■□□□ 1.25
DDX39A-214ENST00000590556 MAP3K9P80192 1104 aa22.86■■□□□ 1.25
DDX39A-214ENST00000590556 HTRA3P83110 453 aa22.86■■□□□ 1.25
DDX39A-214ENST00000590556 ALX1Q15699 326 aa22.86■■□□□ 1.25
DDX39A-214ENST00000590556 LDLRAD1Q5T700 205 aa22.86■■□□□ 1.25
DDX39A-214ENST00000590556 METTL16Q86W50 562 aaKnown RBP22.86■■□□□ 1.25
DDX39A-214ENST00000590556 WRNIP1Q96S55 665 aa22.86■■□□□ 1.25
DDX39A-214ENST00000590556 MINDY4BA8MYZ0 360 aa22.85■■□□□ 1.25
DDX39A-214ENST00000590556 EVX2Q03828 476 aa22.85■■□□□ 1.25
DDX39A-214ENST00000590556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.85■■□□□ 1.25
DDX39A-214ENST00000590556 ESYT1Q9BSJ8 1104 aa22.85■■□□□ 1.25
DDX39A-214ENST00000590556 ZNF112Q9UJU3 913 aa22.85■■□□□ 1.25
DDX39A-214ENST00000590556 UNCXA6NJT0 531 aa22.84■■□□□ 1.25
DDX39A-214ENST00000590556 ANKRD13AQ8IZ07 590 aa22.84■■□□□ 1.25
DDX39A-214ENST00000590556 DSCC1Q9BVC3 393 aa22.84■■□□□ 1.25
DDX39A-214ENST00000590556 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
DDX39A-214ENST00000590556 PHF20L1A8MW92 1017 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 FGAP02671 866 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 INPP5BP32019 993 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 DEFB115Q30KQ5 88 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.83■■□□□ 1.25
DDX39A-214ENST00000590556 HHIPL1Q96JK4 782 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 DNAJC18Q9H819 358 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 TAOK2Q9UL54 1235 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 CSADQ9Y600 493 aa22.83■■□□□ 1.25
DDX39A-214ENST00000590556 RASSF10A6NK89 507 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 SMIM22K7EJ46 135 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 GABPAQ06546 454 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 RGMBQ6NW40 437 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 KIAA1211Q6ZU35 1233 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 PAXIP1Q6ZW49 1069 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-214ENST00000590556 ZKSCAN4Q969J2 545 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-214ENST00000590556 SLC10A4Q96EP9 437 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 DYNLL2Q96FJ2 89 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 CLMNQ96JQ2 1002 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 SWAP70Q9UH65 585 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 ZMYM6O95789 1325 aa22.82■■□□□ 1.24
DDX39A-214ENST00000590556 OTOFQ9HC10 1997 aa22.81■■□□□ 1.24
DDX39A-214ENST00000590556 CTNND1O60716 968 aaKnown RBP22.81■■□□□ 1.24
DDX39A-214ENST00000590556 ZNF157P51786 506 aaPredicted RBP22.81■■□□□ 1.24
DDX39A-214ENST00000590556 PPARAQ07869 468 aa22.81■■□□□ 1.24
DDX39A-214ENST00000590556 VGLL4Q14135 290 aa22.81■■□□□ 1.24
DDX39A-214ENST00000590556 LAMB1P07942 1786 aa22.81■■□□□ 1.24
DDX39A-214ENST00000590556 SLC3A2P08195 630 aaKnown RBP22.8■■□□□ 1.24
DDX39A-214ENST00000590556 TATDN1Q6P1N9 297 aa22.8■■□□□ 1.24
DDX39A-214ENST00000590556 C16orf86Q6ZW13 317 aa22.8■■□□□ 1.24
DDX39A-214ENST00000590556 ELP3Q9H9T3 547 aa22.8■■□□□ 1.24
DDX39A-214ENST00000590556 CTNNA3Q9UI47 895 aa22.8■■□□□ 1.24
DDX39A-214ENST00000590556 SHMT1P34896 483 aa22.79■■□□□ 1.24
DDX39A-214ENST00000590556 CDK8P49336 464 aa22.79■■□□□ 1.24
DDX39A-214ENST00000590556 PTH1RQ03431 593 aa22.79■■□□□ 1.24
DDX39A-214ENST00000590556 NOL9Q5SY16 702 aaKnown RBP22.79■■□□□ 1.24
DDX39A-214ENST00000590556 STK11IPQ8N1F8 1099 aa22.79■■□□□ 1.24
DDX39A-214ENST00000590556 SLC44A5Q8NCS7 719 aa22.79■■□□□ 1.24
DDX39A-214ENST00000590556 ROBO3Q96MS0 1386 aa22.78■■□□□ 1.24
DDX39A-214ENST00000590556 CAP2P40123 477 aa22.78■■□□□ 1.24
DDX39A-214ENST00000590556 RRP1BQ14684 758 aaKnown RBP22.78■■□□□ 1.24
DDX39A-214ENST00000590556 CERKLQ49MI3 558 aaPredicted RBP22.78■■□□□ 1.24
DDX39A-214ENST00000590556 SCYL3Q8IZE3 742 aa22.78■■□□□ 1.24
DDX39A-214ENST00000590556 CCDC102AQ96A19 550 aa22.78■■□□□ 1.24
DDX39A-214ENST00000590556 PICK1Q9NRD5 415 aa22.78■■□□□ 1.24
DDX39A-214ENST00000590556 SNCAIPQ9Y6H5 919 aa22.78■■□□□ 1.24
DDX39A-214ENST00000590556 CTDSPL2Q05D32 466 aa22.77■■□□□ 1.24
DDX39A-214ENST00000590556 GRM1Q13255 1194 aa22.77■■□□□ 1.24
DDX39A-214ENST00000590556 CYP4F22Q6NT55 531 aa22.77■■□□□ 1.24
DDX39A-214ENST00000590556 ZNF287Q9HBT7 754 aa22.77■■□□□ 1.24
DDX39A-214ENST00000590556 ANO2Q9NQ90 1003 aa22.77■■□□□ 1.24
DDX39A-214ENST00000590556 ANAPC4Q9UJX5 808 aa22.77■■□□□ 1.24
DDX39A-214ENST00000590556 U3KPZ7 1027 aaPredicted RBP22.77■■□□□ 1.24
DDX39A-214ENST00000590556 MYH8P13535 1937 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 ZNF213O14771 459 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 GDF11O95390 407 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 ECE1P42892 770 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 HAND2P61296 217 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 PDE4BQ07343 736 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 RASAL3Q86YV0 1011 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 MAP4K1Q92918 833 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 CAPNS2Q96L46 248 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 LSG1Q9H089 658 aaKnown RBP22.76■■□□□ 1.23
DDX39A-214ENST00000590556 MKNK2Q9HBH9 465 aa22.76■■□□□ 1.23
DDX39A-214ENST00000590556 DOCK1Q14185 1865 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms