RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 SRGNP10124 158 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 SEC23AQ15436 765 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 HS1BP3Q53T59 392 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 EYA3Q99504 573 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 MAP3K14Q99558 947 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 NUP62CLQ9H1M0 184 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 TFIP11Q9UBB9 837 aaKnown RBP12.07□□□□□ -0.48
VPS25-203ENST00000589520 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.07□□□□□ -0.48
VPS25-203ENST00000589520 TNRC6CQ9HCJ0 1690 aaKnown RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 RANBP6O60518 1105 aaKnown RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 USP5P45974 858 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 MAP3K11Q16584 847 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 GRIPAP1Q4V328 841 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 ADALQ6DHV7 355 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 DGKHQ86XP1 1220 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 BICD2Q8TD16 824 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 ANKS1AQ92625 1134 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 RNF26Q9BY78 433 aaPredicted RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 ZC3H12CQ9C0D7 883 aaKnown RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 RBSNQ9H1K0 784 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 TCP11L1Q9NUJ3 509 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 PPP1R1BQ9UD71 204 aaPredicted RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 MROH7-TTC4A0A0A0MT08 1334 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 TNKSO95271 1327 aa12.06□□□□□ -0.48
VPS25-203ENST00000589520 MYO5AQ9Y4I1 1855 aaKnown RBP12.06□□□□□ -0.48
VPS25-203ENST00000589520 CASZ1Q86V15 1759 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.481e-8■□□□□ 10.2
VPS25-203ENST00000589520 CDC27P30260 824 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
VPS25-203ENST00000589520 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
VPS25-203ENST00000589520 SF3A1Q15459 793 aaKnown RBP12.05□□□□□ -0.48
VPS25-203ENST00000589520 C12orf60Q5U649 245 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 KRT40Q6A162 431 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
VPS25-203ENST00000589520 CRACR2BQ8N4Y2 399 aaPredicted RBP12.05□□□□□ -0.48
VPS25-203ENST00000589520 MPNDQ8N594 471 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 POLLQ9UGP5 575 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
VPS25-203ENST00000589520 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
VPS25-203ENST00000589520 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
VPS25-203ENST00000589520 PPP6R2O75170 966 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 KIF5BP33176 963 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 GNAQP50148 359 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 FKBP1AP62942 108 aaKnown RBP12.04□□□□□ -0.48
VPS25-203ENST00000589520 STK38Q15208 465 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 CCDC73Q6ZRK6 1079 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 FAM177A1Q8N128 213 aaPredicted RBP12.04□□□□□ -0.48
VPS25-203ENST00000589520 LINC00301Q8NCQ3 95 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 USP28Q96RU2 1077 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 MRIQ9BWK5 157 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 SLC26A6Q9BXS9 759 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 TNMDQ9H2S6 317 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
VPS25-203ENST00000589520 CLSTN2Q9H4D0 955 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 MCM9Q9NXL9 1143 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 GAKO14976 1311 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 TAF1P21675 1872 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 ROBO3Q96MS0 1386 aa12.04□□□□□ -0.48
VPS25-203ENST00000589520 SPTLC2O15270 562 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 SLC34A2O95436 690 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 MMP10P09238 476 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 ANO1Q5XXA6 986 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 CCAR1Q8IX12 1150 aaKnown RBP12.03□□□□□ -0.48
VPS25-203ENST00000589520 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
VPS25-203ENST00000589520 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 ENAHQ8N8S7 591 aaPredicted RBP12.03□□□□□ -0.48
VPS25-203ENST00000589520 CTCFLQ8NI51 663 aaPredicted RBP12.03□□□□□ -0.48
VPS25-203ENST00000589520 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 CNKSR1Q969H4 720 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 FUCA2Q9BTY2 467 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 RTFDC1Q9BY42 306 aaPredicted RBP12.03□□□□□ -0.48
VPS25-203ENST00000589520 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 DACT1Q9NYF0 836 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 MORC2Q9Y6X9 1032 aaPredicted RBP12.03□□□□□ -0.48
VPS25-203ENST00000589520 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
VPS25-203ENST00000589520 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 H0YIN7 160 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 DTNBO60941 627 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms