RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 GBA2Q9HCG7 927 aaPredicted RBP23.39■■□□□ 1.33
CIRBP-220ENST00000588917 ARPP21Q9UBL0 812 aaPredicted RBP23.39■■□□□ 1.33
CIRBP-220ENST00000588917 SAP30BPQ9UHR5 308 aaKnown RBP23.39■■□□□ 1.33
CIRBP-220ENST00000588917 HERC5Q9UII4 1024 aaKnown RBP23.39■■□□□ 1.33
CIRBP-220ENST00000588917 AK9Q5TCS8 1911 aa23.39■■□□□ 1.33
CIRBP-220ENST00000588917 TRPM7Q96QT4 1865 aa23.39■■□□□ 1.33
CIRBP-220ENST00000588917 AOC2O75106 756 aa23.38■■□□□ 1.33
CIRBP-220ENST00000588917 IREB2P48200 963 aaKnown RBP23.38■■□□□ 1.33
CIRBP-220ENST00000588917 TDO2P48775 406 aa23.38■■□□□ 1.33
CIRBP-220ENST00000588917 TTLL12Q14166 644 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-220ENST00000588917 ALX1Q15699 326 aa23.38■■□□□ 1.33
CIRBP-220ENST00000588917 SBK1Q52WX2 424 aa23.38■■□□□ 1.33
CIRBP-220ENST00000588917 ZNF341Q9BYN7 854 aa23.38■■□□□ 1.33
CIRBP-220ENST00000588917 NAPBQ9H115 298 aa23.38■■□□□ 1.33
CIRBP-220ENST00000588917 USP17L12C9JPN9 530 aa23.37■■□□□ 1.33
CIRBP-220ENST00000588917 USP17L21D6R901 530 aa23.37■■□□□ 1.33
CIRBP-220ENST00000588917 SGSM2O43147 1006 aa23.37■■□□□ 1.33
CIRBP-220ENST00000588917 HSPD1P10809 573 aaKnown RBP23.37■■□□□ 1.33
CIRBP-220ENST00000588917 KIAA1211Q6ZU35 1233 aa23.37■■□□□ 1.33
CIRBP-220ENST00000588917 ZNF589Q86UQ0 364 aaPredicted RBP23.37■■□□□ 1.33
CIRBP-220ENST00000588917 CRACR2BQ8N4Y2 399 aaPredicted RBP23.37■■□□□ 1.33
CIRBP-220ENST00000588917 EHD4Q9H223 541 aa23.37■■□□□ 1.33
CIRBP-220ENST00000588917 MAP3K11Q16584 847 aa23.36■■□□□ 1.33
CIRBP-220ENST00000588917 C12orf60Q5U649 245 aa23.36■■□□□ 1.33
CIRBP-220ENST00000588917 CTR9Q6PD62 1173 aa23.36■■□□□ 1.33
CIRBP-220ENST00000588917 MIGA2Q7L4E1 593 aa23.36■■□□□ 1.33
CIRBP-220ENST00000588917 METTL16Q86W50 562 aaKnown RBP23.36■■□□□ 1.33
CIRBP-220ENST00000588917 DSCC1Q9BVC3 393 aa23.36■■□□□ 1.33
CIRBP-220ENST00000588917 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.36■■□□□ 1.338e-8■□□□□ 8.6
CIRBP-220ENST00000588917 SERPINB13Q9UIV8 391 aa23.36■■□□□ 1.33
CIRBP-220ENST00000588917 THSD7BQ9C0I4 1608 aa23.35■■□□□ 1.33
CIRBP-220ENST00000588917 EIF5BO60841 1220 aaKnown RBP23.35■■□□□ 1.33
CIRBP-220ENST00000588917 USP2O75604 605 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-220ENST00000588917 CDAN1Q8IWY9 1227 aa23.35■■□□□ 1.33
CIRBP-220ENST00000588917 ESYT1Q9BSJ8 1104 aa23.35■■□□□ 1.33
CIRBP-220ENST00000588917 CTNNA3Q9UI47 895 aa23.35■■□□□ 1.33
CIRBP-220ENST00000588917 ANGEL1Q9UNK9 670 aaKnown RBP23.35■■□□□ 1.33
CIRBP-220ENST00000588917 CA12O43570 354 aa23.34■■□□□ 1.33
CIRBP-220ENST00000588917 SLC3A2P08195 630 aaKnown RBP23.34■■□□□ 1.33
CIRBP-220ENST00000588917 PRKG1Q13976 671 aa23.34■■□□□ 1.33
CIRBP-220ENST00000588917 ABHD8Q96I13 439 aa23.34■■□□□ 1.33
CIRBP-220ENST00000588917 FGAP02671 866 aa23.33■■□□□ 1.33
CIRBP-220ENST00000588917 PLCD1P51178 756 aa23.33■■□□□ 1.33
CIRBP-220ENST00000588917 MAP3K9P80192 1104 aa23.33■■□□□ 1.33
CIRBP-220ENST00000588917 VPS53Q5VIR6 699 aa23.33■■□□□ 1.33
CIRBP-220ENST00000588917 ANKRD13AQ8IZ07 590 aa23.33■■□□□ 1.33
CIRBP-220ENST00000588917 ZNF287Q9HBT7 754 aa23.33■■□□□ 1.33
CIRBP-220ENST00000588917 SWAP70Q9UH65 585 aa23.33■■□□□ 1.33
CIRBP-220ENST00000588917 ZMYM6O95789 1325 aa23.33■■□□□ 1.32
CIRBP-220ENST00000588917 FOCADQ5VW36 1801 aa23.32■■□□□ 1.32
CIRBP-220ENST00000588917 MINDY4BA8MYZ0 360 aa23.32■■□□□ 1.32
CIRBP-220ENST00000588917 EPB41L4AQ9HCS5 686 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-220ENST00000588917 ZNF112Q9UJU3 913 aa23.32■■□□□ 1.32
CIRBP-220ENST00000588917 HUNKP57058 714 aa23.31■■□□□ 1.32
CIRBP-220ENST00000588917 LDLRAD1Q5T700 205 aa23.31■■□□□ 1.32
CIRBP-220ENST00000588917 UBE2Q2LH0YL09 131 aa23.3■■□□□ 1.32
CIRBP-220ENST00000588917 CTNND1O60716 968 aaKnown RBP23.3■■□□□ 1.32
CIRBP-220ENST00000588917 NOGQ13253 232 aa23.3■■□□□ 1.32
CIRBP-220ENST00000588917 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.3■■□□□ 1.322e-8■■□□□ 13.6
CIRBP-220ENST00000588917 WRNIP1Q96S55 665 aa23.3■■□□□ 1.32
CIRBP-220ENST00000588917 GINM1Q9NU53 330 aa23.3■■□□□ 1.32
CIRBP-220ENST00000588917 TSKSQ9UJT2 592 aa23.3■■□□□ 1.32
CIRBP-220ENST00000588917 CSADQ9Y600 493 aa23.3■■□□□ 1.32
CIRBP-220ENST00000588917 SSC5DA1L4H1 1573 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 ZNF213O14771 459 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 FOXP2O15409 715 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 GABPAQ06546 454 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 SLC4A8Q2Y0W8 1093 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 TATDN1Q6P1N9 297 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 SLC10A4Q96EP9 437 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 ANAPC4Q9UJX5 808 aa23.29■■□□□ 1.32
CIRBP-220ENST00000588917 U3KPZ7 1027 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-220ENST00000588917 CDK5RAP2Q96SN8 1893 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 PHF20L1A8MW92 1017 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 CYP2D6P10635 497 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 PDE4BQ07343 736 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 PPARAQ07869 468 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 MOB2Q70IA6 237 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 MAP4K1Q92918 833 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 IL25Q9H293 177 aa23.28■■□□□ 1.32
CIRBP-220ENST00000588917 PAPPA2Q9BXP8 1791 aa23.27■■□□□ 1.32
CIRBP-220ENST00000588917 REC8O95072 547 aa23.27■■□□□ 1.32
CIRBP-220ENST00000588917 IMMTQ16891 758 aaKnown RBP23.27■■□□□ 1.32
CIRBP-220ENST00000588917 C16orf86Q6ZW13 317 aa23.27■■□□□ 1.32
CIRBP-220ENST00000588917 MKNK2Q9HBH9 465 aa23.27■■□□□ 1.32
CIRBP-220ENST00000588917 ANO2Q9NQ90 1003 aa23.27■■□□□ 1.32
CIRBP-220ENST00000588917 FZD1Q9UP38 647 aa23.27■■□□□ 1.32
CIRBP-220ENST00000588917 MYH1P12882 1939 aa23.27■■□□□ 1.32
CIRBP-220ENST00000588917 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
CIRBP-220ENST00000588917 PCP11498 1178 aaKnown RBP23.26■■□□□ 1.31
CIRBP-220ENST00000588917 CDK8P49336 464 aa23.26■■□□□ 1.31
CIRBP-220ENST00000588917 CERKLQ49MI3 558 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-220ENST00000588917 RGMBQ6NW40 437 aa23.26■■□□□ 1.31
CIRBP-220ENST00000588917 CCDC102AQ96A19 550 aa23.26■■□□□ 1.31
CIRBP-220ENST00000588917 CCDC17Q96LX7 622 aa23.26■■□□□ 1.31
CIRBP-220ENST00000588917 EPB41L2O43491 1005 aaKnown RBP23.25■■□□□ 1.31
CIRBP-220ENST00000588917 CAP2P40123 477 aa23.25■■□□□ 1.31
CIRBP-220ENST00000588917 NT5C2P49902 561 aa23.25■■□□□ 1.31
CIRBP-220ENST00000588917 PTH1RQ03431 593 aa23.25■■□□□ 1.31
CIRBP-220ENST00000588917 NOL9Q5SY16 702 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms