RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 KCNB2Q92953 911 aa20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 CNNM2Q9H8M5 875 aa20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 DDTLA6NHG4 134 aaPredicted RBP20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 CYP21A2P08686 494 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 TRDNQ13061 729 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 AKNAD1Q5T1N1 836 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 C16orf86Q6ZW13 317 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 ZFPM1Q8IX07 1006 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 IL27Q8NEV9 243 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 TEPSINQ96N21 525 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 C22orf23Q9BZE7 217 aa20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 POLR2AP24928 1970 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-211ENST00000588907 RBM25P49756 843 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-211ENST00000588907 PLCD1P51178 756 aa20.11■□□□□ 0.81
SCAMP4-211ENST00000588907 CHADLQ6NUI6 762 aa20.11■□□□□ 0.81
SCAMP4-211ENST00000588907 MFSD6Q6ZSS7 791 aa20.11■□□□□ 0.81
SCAMP4-211ENST00000588907 SH3BP5LQ7L8J4 393 aa20.11■□□□□ 0.81
SCAMP4-211ENST00000588907 HMGB1P09429 215 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 FGRP09769 529 aa20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 PSMA5P28066 241 aa20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 HAND2P61296 217 aa20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 MAP3K10Q02779 954 aa20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 GABPAQ06546 454 aa20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 IL17RAQ96F46 866 aa20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 KRT23Q9C075 422 aa20.1■□□□□ 0.81
SCAMP4-211ENST00000588907 ADM5C9JUS6 153 aa20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 ORC4O43929 436 aa20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 CYP2D6P10635 497 aa20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 RALYLQ86SE5 291 aaKnown RBP20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 USP48Q86UV5 1035 aa20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 MKNK2Q9HBH9 465 aa20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 SIPA1L1O43166 1804 aa20.09■□□□□ 0.81
SCAMP4-211ENST00000588907 MYH8P13535 1937 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 CYP2D7A0A087X1C5 515 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 POTEIP0CG38 1075 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 POTEJP0CG39 1038 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 MAP1SQ66K74 1059 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 SMC1BQ8NDV3 1235 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 NCOA7Q8NI08 942 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 ESR2Q92731 530 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 CDCA5Q96FF9 252 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 CCDC17Q96LX7 622 aa20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.08■□□□□ 0.81
SCAMP4-211ENST00000588907 E7EWF7 191 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 KIF3CO14782 793 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 PPP1R12BO60237 982 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 CDK8P49336 464 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 CTDSPL2Q05D32 466 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 NBPF12Q5TAG4 269 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 TBC1D10CQ8IV04 446 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 ZNF444Q8N0Y2 327 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 ZNF784Q8NCA9 323 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 ZNF341Q9BYN7 854 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 TM6SF1Q9BZW5 370 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 GINM1Q9NU53 330 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 SNX14Q9Y5W7 946 aa20.07■□□□□ 0.8
SCAMP4-211ENST00000588907 TOMM70O94826 608 aa20.06■□□□□ 0.8
SCAMP4-211ENST00000588907 PPP4R3BQ5MIZ7 849 aa20.06■□□□□ 0.8
SCAMP4-211ENST00000588907 TATDN1Q6P1N9 297 aa20.06■□□□□ 0.8
SCAMP4-211ENST00000588907 NBPF3Q9H094 633 aa20.06■□□□□ 0.8
SCAMP4-211ENST00000588907 FKBP1BP68106 108 aa20.05■□□□□ 0.8
SCAMP4-211ENST00000588907 DYNLL2Q96FJ2 89 aa20.05■□□□□ 0.8
SCAMP4-211ENST00000588907 NEK1Q96PY6 1258 aa20.05■□□□□ 0.8
SCAMP4-211ENST00000588907 TOMM22Q9NS69 142 aa20.05■□□□□ 0.8
SCAMP4-211ENST00000588907 SCAF8Q9UPN6 1271 aaKnown RBP20.05■□□□□ 0.8
SCAMP4-211ENST00000588907 UNCXA6NJT0 531 aa20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 SHMT1P34896 483 aa20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 CERKLQ49MI3 558 aaPredicted RBP20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 CCDC178Q5BJE1 867 aa20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 RASEFQ8IZ41 740 aa20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 MTA3Q9BTC8 594 aa20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 DNAJC18Q9H819 358 aa20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 PLIN4Q96Q06 1357 aa20.04■□□□□ 0.8
SCAMP4-211ENST00000588907 NEDD4P46934 1319 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 WDR19Q8NEZ3 1342 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 MCM5P33992 734 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 IREB2P48200 963 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 FSTL1Q12841 308 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 SART3Q15020 963 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 IQCA1Q86XH1 822 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 CDAN1Q8IWY9 1227 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 SSC5DA1L4H1 1573 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 PAPPA2Q9BXP8 1791 aa20.03■□□□□ 0.8
SCAMP4-211ENST00000588907 TSPY2A6NKD2 308 aa20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 RANBP6O60518 1105 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 CTNND1O60716 968 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 TSPY3P0CV98 308 aa20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 TSPY8P0CW00 308 aa20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 RASA1P20936 1047 aa20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 RRP12Q5JTH9 1297 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 BLOC1S2Q6QNY1 142 aa20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 MIGA2Q7L4E1 593 aa20.02■□□□□ 0.8
SCAMP4-211ENST00000588907 ARMC9Q7Z3E5 817 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms