RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 PI4KBQ9UBF8 816 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 GJA3Q9Y6H8 435 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 NAV1Q8NEY1 1877 aa12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 NEDD4P46934 1319 aa12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 ZC3H4Q9UPT8 1303 aaKnown RBP12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 LAMB1P07942 1786 aa12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 TNNI2P48788 182 aa12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 SYNE3Q6ZMZ3 975 aa12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 C16orf86Q6ZW13 317 aa12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 FOXP4Q8IVH2 680 aaPredicted RBP12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 CNOT7Q9UIV1 285 aaKnown RBP12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
NEDD4L-224ENST00000588712 IFIT3O14879 490 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.427e-7■■■□□ 19.1
NEDD4L-224ENST00000588712 GMPSP49915 693 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 PRELPP51888 382 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 TNFAIP1Q13829 316 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 SLKQ9H2G2 1235 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 SERPINB13Q9UIV8 391 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 CIZ1Q9ULV3 898 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 ECM29Q5VYK3 1845 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 CDK5RAP2Q96SN8 1893 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 MYH1P12882 1939 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 CYP2D7A0A087X1C5 515 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 PLCD1P51178 756 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 RCAN1P53805 252 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 PPP2R5BQ15173 497 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 TMEM67Q5HYA8 995 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 NOL8Q76FK4 1167 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 FAM83AQ86UY5 434 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 SGMS1Q86VZ5 419 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 IGDCC4Q8TDY8 1250 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 ZBED3Q96IU2 234 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 TRIM34Q9BYJ4 488 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 ZNF70Q9UC06 446 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
NEDD4L-224ENST00000588712 SBF1O95248 1867 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 SH2B2O14492 632 aaPredicted RBP12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 CYP2D6P10635 497 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 ANTXR2P58335 489 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 WTAPQ15007 396 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 CYB5R4Q7L1T6 521 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 CHST3Q7LGC8 479 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 FAM151AQ8WW52 585 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 DDX4Q9NQI0 724 aaKnown RBP12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 TCP11L1Q9NUJ3 509 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 CCDC69A6NI79 296 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 PFKFB2O60825 505 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 CDK8P49336 464 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 ME3Q16798 604 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 DGKHQ86XP1 1220 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 ZSCAN29Q8IWY8 852 aaPredicted RBP12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 CCDC17Q96LX7 622 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 LLPHQ9BRT6 129 aaKnown RBP12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
NEDD4L-224ENST00000588712 ATRNL1Q5VV63 1379 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 WNT10BO00744 389 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 NFIAQ12857 509 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 C9orf131Q5VYM1 1079 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 LRRC2Q9BYS8 371 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 GPRC5DQ9NZD1 345 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 SLC12A7Q9Y666 1083 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 ZNF541Q9H0D2 1346 aa12.4□□□□□ -0.42
NEDD4L-224ENST00000588712 DDX60LQ5H9U9 1706 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 CALM1P0DP23 149 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 CALM2P0DP24 149 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 CALM3P0DP25 149 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 TFAP4Q01664 338 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 GABPAQ06546 454 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 APOBRQ0VD83 1088 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 CHMP5Q9NZZ3 219 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 KIF3AQ9Y496 699 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 KLF18A0A0U1RQI7 1052 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 CCDC196A0A1B0GTZ2 297 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 PRDM1O75626 825 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 PDIA3P30101 505 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 TCP10Q12799 353 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 KIF4BQ2VIQ3 1234 aa12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 CPLX2Q6PUV4 134 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-224ENST00000588712 METTL16Q86W50 562 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms