RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 ATP8A2Q9NTI2 1148 aa25.75■■□□□ 1.71
RETREG3-204ENST00000586796 A0A0D9SFI3 127 aa25.74■■□□□ 1.71
RETREG3-204ENST00000586796 TTC6Q86TZ1 520 aa25.74■■□□□ 1.71
RETREG3-204ENST00000586796 HELLSQ9NRZ9 838 aa25.74■■□□□ 1.71
RETREG3-204ENST00000586796 ZNF112Q9UJU3 913 aa25.74■■□□□ 1.71
RETREG3-204ENST00000586796 TBC1D12O60347 775 aa25.73■■□□□ 1.71
RETREG3-204ENST00000586796 CYP2D6P10635 497 aa25.73■■□□□ 1.71
RETREG3-204ENST00000586796 PLCD1P51178 756 aa25.73■■□□□ 1.71
RETREG3-204ENST00000586796 MAP3K10Q02779 954 aa25.73■■□□□ 1.71
RETREG3-204ENST00000586796 FOXP4Q8IVH2 680 aaPredicted RBP25.73■■□□□ 1.71
RETREG3-204ENST00000586796 ZIC5Q96T25 663 aa25.73■■□□□ 1.71
RETREG3-204ENST00000586796 DIAPH3Q9NSV4 1193 aa25.73■■□□□ 1.71
RETREG3-204ENST00000586796 HERC5Q9UII4 1024 aaKnown RBP25.73■■□□□ 1.71
RETREG3-204ENST00000586796 UNCXA6NJT0 531 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 GSG1L2A8MUP6 293 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 PHF20L1A8MW92 1017 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 GNAT2P19087 354 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 EVX2Q03828 476 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 NOGQ13253 232 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 MCMDC2Q4G0Z9 681 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 CNKSR2Q8WXI2 1034 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 SNCAIPQ9Y6H5 919 aa25.72■■□□□ 1.71
RETREG3-204ENST00000586796 NAV1Q8NEY1 1877 aa25.71■■□□□ 1.71
RETREG3-204ENST00000586796 CYP2D7A0A087X1C5 515 aa25.71■■□□□ 1.71
RETREG3-204ENST00000586796 CWC27Q6UX04 472 aaKnown RBP25.71■■□□□ 1.71
RETREG3-204ENST00000586796 TICAM2Q86XR7 235 aa25.71■■□□□ 1.71
RETREG3-204ENST00000586796 OPTNQ96CV9 577 aa25.71■■□□□ 1.71
RETREG3-204ENST00000586796 WNK4Q96J92 1243 aa25.71■■□□□ 1.71
RETREG3-204ENST00000586796 OTOFQ9HC10 1997 aa25.71■■□□□ 1.71
RETREG3-204ENST00000586796 MYH1P12882 1939 aa25.71■■□□□ 1.71
RETREG3-204ENST00000586796 PATL2C9JE40 543 aaKnown RBP25.7■■□□□ 1.7
RETREG3-204ENST00000586796 USP17L12C9JPN9 530 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 USP17L21D6R901 530 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 HIP1O00291 1037 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 KIF23Q02241 960 aaPredicted RBP25.7■■□□□ 1.7
RETREG3-204ENST00000586796 SPRYD7Q5W111 196 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 AMOTL1Q8IY63 956 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 DNAJC18Q9H819 358 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 SERPINB13Q9UIV8 391 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 CEP350Q5VT06 3117 aa25.7■■□□□ 1.7
RETREG3-204ENST00000586796 TDO2P48775 406 aa25.69■■□□□ 1.7
RETREG3-204ENST00000586796 CTR9Q6PD62 1173 aa25.69■■□□□ 1.7
RETREG3-204ENST00000586796 OTUD5Q96G74 571 aa25.69■■□□□ 1.7
RETREG3-204ENST00000586796 GJA5P36382 358 aa25.68■■□□□ 1.7
RETREG3-204ENST00000586796 MAP2K2P36507 400 aa25.68■■□□□ 1.7
RETREG3-204ENST00000586796 RRP1BQ14684 758 aaKnown RBP25.68■■□□□ 1.7
RETREG3-204ENST00000586796 METTL16Q86W50 562 aaKnown RBP25.68■■□□□ 1.7
RETREG3-204ENST00000586796 SCYL3Q8IZE3 742 aa25.68■■□□□ 1.7
RETREG3-204ENST00000586796 EPB41L4AQ9HCS5 686 aaPredicted RBP25.68■■□□□ 1.7
RETREG3-204ENST00000586796 SMIM22K7EJ46 135 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 CTNND1O60716 968 aaKnown RBP25.67■■□□□ 1.7
RETREG3-204ENST00000586796 VPS53Q5VIR6 699 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 ZNF589Q86UQ0 364 aaPredicted RBP25.67■■□□□ 1.7
RETREG3-204ENST00000586796 IFNL3Q8IZI9 196 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 JMYQ8N9B5 988 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 DYNLL2Q96FJ2 89 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 NACAP1Q9BZK3 213 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 EHD4Q9H223 541 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 PICK1Q9NRD5 415 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.67■■□□□ 1.7
RETREG3-204ENST00000586796 SIPA1L1O43166 1804 aa25.67■■□□□ 1.7
RETREG3-204ENST00000586796 DDX60LQ5H9U9 1706 aaKnown RBP25.66■■□□□ 1.7
RETREG3-204ENST00000586796 MINDY4BA8MYZ0 360 aa25.66■■□□□ 1.7
RETREG3-204ENST00000586796 NOL9Q5SY16 702 aaKnown RBP25.66■■□□□ 1.7
RETREG3-204ENST00000586796 C12orf60Q5U649 245 aa25.66■■□□□ 1.7
RETREG3-204ENST00000586796 GIMAP6Q6P9H5 292 aa25.66■■□□□ 1.7
RETREG3-204ENST00000586796 ERO1BQ86YB8 467 aa25.66■■□□□ 1.7
RETREG3-204ENST00000586796 STK11IPQ8N1F8 1099 aa25.66■■□□□ 1.7
RETREG3-204ENST00000586796 ARPP21Q9UBL0 812 aaPredicted RBP25.66■■□□□ 1.7
RETREG3-204ENST00000586796 CCDC171Q6TFL3 1326 aa25.65■■□□□ 1.7
RETREG3-204ENST00000586796 SPDYE5A6NIY4 337 aa25.65■■□□□ 1.7
RETREG3-204ENST00000586796 GDF11O95390 407 aa25.65■■□□□ 1.7
RETREG3-204ENST00000586796 NAPBQ9H115 298 aa25.65■■□□□ 1.7
RETREG3-204ENST00000586796 BAZ2AQ9UIF9 1905 aaKnown RBP25.65■■□□□ 1.7
RETREG3-204ENST00000586796 ZBTB48P10074 688 aaPredicted RBP25.64■■□□□ 1.7
RETREG3-204ENST00000586796 CAP2P40123 477 aa25.64■■□□□ 1.7
RETREG3-204ENST00000586796 CCDC84Q86UT8 332 aaPredicted RBP25.64■■□□□ 1.7
RETREG3-204ENST00000586796 SLC44A5Q8NCS7 719 aa25.64■■□□□ 1.7
RETREG3-204ENST00000586796 PTPRAP18433 802 aa25.63■■□□□ 1.69
RETREG3-204ENST00000586796 CHMLP26374 656 aa25.63■■□□□ 1.69
RETREG3-204ENST00000586796 MFAP1P55081 439 aaKnown RBP25.63■■□□□ 1.69
RETREG3-204ENST00000586796 SHROOM1Q2M3G4 852 aaPredicted RBP25.63■■□□□ 1.69
RETREG3-204ENST00000586796 ZHX2Q9Y6X8 837 aa25.63■■□□□ 1.69
RETREG3-204ENST00000586796 FOXP2O15409 715 aa25.62■■□□□ 1.69
RETREG3-204ENST00000586796 SHMT1P34896 483 aa25.62■■□□□ 1.69
RETREG3-204ENST00000586796 JAG1P78504 1218 aa25.62■■□□□ 1.69
RETREG3-204ENST00000586796 MAP2K1Q02750 393 aaPredicted RBP25.62■■□□□ 1.69
RETREG3-204ENST00000586796 PPATQ06203 517 aa25.62■■□□□ 1.69
RETREG3-204ENST00000586796 GABPAQ06546 454 aa25.62■■□□□ 1.69
RETREG3-204ENST00000586796 CERKLQ49MI3 558 aaPredicted RBP25.62■■□□□ 1.69
RETREG3-204ENST00000586796 SBK1Q52WX2 424 aa25.62■■□□□ 1.69
RETREG3-204ENST00000586796 TATDN1Q6P1N9 297 aa25.62■■□□□ 1.69
RETREG3-204ENST00000586796 IRF6O14896 467 aa25.61■■□□□ 1.69
RETREG3-204ENST00000586796 HSPD1P10809 573 aaKnown RBP25.61■■□□□ 1.69
RETREG3-204ENST00000586796 PPIL2Q13356 520 aa25.61■■□□□ 1.69
RETREG3-204ENST00000586796 BMP2KLQ5H9B9 411 aa25.61■■□□□ 1.69
RETREG3-204ENST00000586796 MANSC4A6NHS7 340 aaPredicted RBP25.6■■□□□ 1.69
RETREG3-204ENST00000586796 CDK8P49336 464 aa25.6■■□□□ 1.69
RETREG3-204ENST00000586796 RUFY2Q8WXA3 655 aa25.6■■□□□ 1.69
RETREG3-204ENST00000586796 BEGAINQ9BUH8 593 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms