RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 DNAJC18Q9H819 358 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 DOCK1Q14185 1865 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 THSD7BQ9C0I4 1608 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 PHF20L1A8MW92 1017 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 PLCD1P51178 756 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 MAP3K9P80192 1104 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 RRP1BQ14684 758 aaKnown RBP15.17■□□□□ 0.02
RETREG3-203ENST00000585894 ANKRD13AQ8IZ07 590 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
RETREG3-203ENST00000585894 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-203ENST00000585894 MYH8P13535 1937 aa15.17■□□□□ 0.02
RETREG3-203ENST00000585894 LAMB1P07942 1786 aa15.16■□□□□ 0.02
RETREG3-203ENST00000585894 GSG1L2A8MUP6 293 aa15.16■□□□□ 0.02
RETREG3-203ENST00000585894 SLC10A3P09131 477 aa15.16■□□□□ 0.02
RETREG3-203ENST00000585894 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
RETREG3-203ENST00000585894 SLC10A4Q96EP9 437 aa15.16■□□□□ 0.02
RETREG3-203ENST00000585894 DHX36Q9H2U1 1008 aaKnown RBP15.16■□□□□ 0.02
RETREG3-203ENST00000585894 EPB41L4AQ9HCS5 686 aaPredicted RBP15.16■□□□□ 0.02
RETREG3-203ENST00000585894 PI4KBQ9UBF8 816 aa15.16■□□□□ 0.02
RETREG3-203ENST00000585894 SNCAIPQ9Y6H5 919 aa15.16■□□□□ 0.02
RETREG3-203ENST00000585894 POLR3DP05423 398 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-203ENST00000585894 GJA5P36382 358 aa15.15■□□□□ 0.02
RETREG3-203ENST00000585894 ECE1P42892 770 aa15.15■□□□□ 0.02
RETREG3-203ENST00000585894 SHROOM1Q2M3G4 852 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-203ENST00000585894 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
RETREG3-203ENST00000585894 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
RETREG3-203ENST00000585894 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-203ENST00000585894 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
RETREG3-203ENST00000585894 FOXP2O15409 715 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 HLA-DOAP06340 250 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 MAP3K10Q02779 954 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-203ENST00000585894 DYNLL2Q96FJ2 89 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 IL25Q9H293 177 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 DIAPH3Q9NSV4 1193 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 ATP8A2Q9NTI2 1148 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 CSADQ9Y600 493 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 PHIPQ8WWQ0 1821 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 USP17L21D6R901 530 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 APPP05067 770 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 OPTNQ96CV9 577 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 OTUD5Q96G74 571 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 WNK4Q96J92 1243 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 HELLSQ9NRZ9 838 aa15.14■□□□□ 0.01
RETREG3-203ENST00000585894 TBC1D12O60347 775 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 JAG1P78504 1218 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 KIF23Q02241 960 aaPredicted RBP15.13■□□□□ 0.01
RETREG3-203ENST00000585894 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 SPRYD7Q5W111 196 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 CTR9Q6PD62 1173 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 TTC6Q86TZ1 520 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 STK11IPQ8N1F8 1099 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 HERC5Q9UII4 1024 aaKnown RBP15.13■□□□□ 0.01
RETREG3-203ENST00000585894 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
RETREG3-203ENST00000585894 GDF11O95390 407 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 TDO2P48775 406 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 PATL2C9JE40 543 aaKnown RBP15.12■□□□□ 0.01
RETREG3-203ENST00000585894 GNAT2P19087 354 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 NOGQ13253 232 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
RETREG3-203ENST00000585894 FOXP4Q8IVH2 680 aaPredicted RBP15.12■□□□□ 0.01
RETREG3-203ENST00000585894 SCYL3Q8IZE3 742 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 IFNL3Q8IZI9 196 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 DDRGK1Q96HY6 314 aa15.12■□□□□ 0.01
RETREG3-203ENST00000585894 CCDC171Q6TFL3 1326 aa15.11■□□□□ 0.01
RETREG3-203ENST00000585894 SPDYE5A6NIY4 337 aa15.11■□□□□ 0.01
RETREG3-203ENST00000585894 MINDY4BA8MYZ0 360 aa15.11■□□□□ 0.01
RETREG3-203ENST00000585894 CHMLP26374 656 aa15.11■□□□□ 0.01
RETREG3-203ENST00000585894 SHMT1P34896 483 aa15.11■□□□□ 0.01
RETREG3-203ENST00000585894 NOL9Q5SY16 702 aaKnown RBP15.11■□□□□ 0.01
RETREG3-203ENST00000585894 JMYQ8N9B5 988 aa15.11■□□□□ 0.01
RETREG3-203ENST00000585894 EHD4Q9H223 541 aa15.11■□□□□ 0.01
RETREG3-203ENST00000585894 PTPRFP10586 1907 aa15.1■□□□□ 0.01
RETREG3-203ENST00000585894 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
RETREG3-203ENST00000585894 CAP2P40123 477 aa15.1■□□□□ 0.01
RETREG3-203ENST00000585894 GABPAQ06546 454 aa15.1■□□□□ 0.01
RETREG3-203ENST00000585894 UNCXA6NJT0 531 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 PTPRAP18433 802 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 ERO1BQ86YB8 467 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 NAPBQ9H115 298 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 PICK1Q9NRD5 415 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
RETREG3-203ENST00000585894 HIP1O00291 1037 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 IRF6O14896 467 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 HSPD1P10809 573 aaKnown RBP15.09■□□□□ 0.01
RETREG3-203ENST00000585894 MAP2K2P36507 400 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 TATDN1Q6P1N9 297 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 GIMAP6Q6P9H5 292 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 TICAM2Q86XR7 235 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 AMOTL1Q8IY63 956 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 NACAP1Q9BZK3 213 aa15.09■□□□□ 0.01
RETREG3-203ENST00000585894 GH2P01242 217 aa15.08■□□□□ 0
RETREG3-203ENST00000585894 ZBTB48P10074 688 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms