RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 B4GALNT3Q6L9W6 998 aa24.35■■□□□ 1.49
SS18-218ENST00000581021 KBTBD3Q8NAB2 608 aa24.35■■□□□ 1.49
SS18-218ENST00000581021 ARMT1Q9H993 441 aa24.35■■□□□ 1.49
SS18-218ENST00000581021 MBD4O95243 580 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 TBC1D8O95759 1140 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 UBE3CQ15386 1083 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 CCDC84Q86UT8 332 aaPredicted RBP24.34■■□□□ 1.49
SS18-218ENST00000581021 METTL16Q86W50 562 aaKnown RBP24.34■■□□□ 1.49
SS18-218ENST00000581021 CERS3Q8IU89 383 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 SCYL3Q8IZE3 742 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.34■■□□□ 1.49
SS18-218ENST00000581021 DHX36Q9H2U1 1008 aaKnown RBP24.34■■□□□ 1.49
SS18-218ENST00000581021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.34■■□□□ 1.49
SS18-218ENST00000581021 PI4KBQ9UBF8 816 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 STAP2Q9UGK3 403 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 NAV1Q8NEY1 1877 aa24.34■■□□□ 1.49
SS18-218ENST00000581021 GLRX3O76003 335 aaKnown RBP24.33■■□□□ 1.49
SS18-218ENST00000581021 USP5P45974 858 aa24.33■■□□□ 1.49
SS18-218ENST00000581021 PPATQ06203 517 aa24.33■■□□□ 1.49
SS18-218ENST00000581021 SHROOM1Q2M3G4 852 aaPredicted RBP24.33■■□□□ 1.49
SS18-218ENST00000581021 SDR42E1Q8WUS8 393 aa24.33■■□□□ 1.49
SS18-218ENST00000581021 PUS7LQ9H0K6 701 aaKnown RBP24.33■■□□□ 1.49
SS18-218ENST00000581021 MYH1P12882 1939 aa24.33■■□□□ 1.49
SS18-218ENST00000581021 CCL15-CCL14A0A0B4J2E2 113 aa24.32■■□□□ 1.48
SS18-218ENST00000581021 PRKAB2O43741 272 aa24.32■■□□□ 1.48
SS18-218ENST00000581021 PDE1AP54750 535 aa24.32■■□□□ 1.48
SS18-218ENST00000581021 JAG1P78504 1218 aa24.32■■□□□ 1.48
SS18-218ENST00000581021 NUCB1Q02818 461 aa24.32■■□□□ 1.48
SS18-218ENST00000581021 CCL15Q16663 113 aa24.32■■□□□ 1.48
SS18-218ENST00000581021 PHIPQ8WWQ0 1821 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 CASP8AP2Q9UKL3 1982 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 ERC2O15083 957 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 CTNND1O60716 968 aaKnown RBP24.31■■□□□ 1.48
SS18-218ENST00000581021 PTPRAP18433 802 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 GTF2A2P52657 109 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 INHBEP58166 350 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 MOGSQ13724 837 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 CRNKL1Q9BZJ0 848 aaKnown RBP24.31■■□□□ 1.48
SS18-218ENST00000581021 HERC5Q9UII4 1024 aaKnown RBP24.31■■□□□ 1.48
SS18-218ENST00000581021 KCNH4Q9UQ05 1017 aa24.31■■□□□ 1.48
SS18-218ENST00000581021 CHD1LQ86WJ1 897 aa24.3■■□□□ 1.48
SS18-218ENST00000581021 FAM43AQ8N2R8 423 aa24.3■■□□□ 1.48
SS18-218ENST00000581021 CFHR5Q9BXR6 569 aa24.3■■□□□ 1.48
SS18-218ENST00000581021 DCP1AQ9NPI6 582 aaPredicted RBP24.3■■□□□ 1.48
SS18-218ENST00000581021 PLCD1P51178 756 aa24.29■■□□□ 1.48
SS18-218ENST00000581021 OSBP2Q969R2 916 aa24.29■■□□□ 1.48
SS18-218ENST00000581021 ZBTB47Q9UFB7 747 aaPredicted RBP24.29■■□□□ 1.48
SS18-218ENST00000581021 ZHX2Q9Y6X8 837 aa24.29■■□□□ 1.48
SS18-218ENST00000581021 ATAD5Q96QE3 1844 aa24.28■■□□□ 1.48
SS18-218ENST00000581021 RNF113AO15541 343 aaKnown RBP24.28■■□□□ 1.48
SS18-218ENST00000581021 CYP2D6P10635 497 aa24.28■■□□□ 1.48
SS18-218ENST00000581021 SNAPC2Q13487 334 aa24.28■■□□□ 1.48
SS18-218ENST00000581021 ZSCAN25Q6NSZ9 544 aa24.28■■□□□ 1.48
SS18-218ENST00000581021 PICK1Q9NRD5 415 aa24.28■■□□□ 1.48
SS18-218ENST00000581021 BTBD19C9JJ37 291 aa24.27■■□□□ 1.48
SS18-218ENST00000581021 SMIM22K7EJ46 135 aa24.27■■□□□ 1.48
SS18-218ENST00000581021 CETPP11597 493 aa24.27■■□□□ 1.48
SS18-218ENST00000581021 CAP2P40123 477 aa24.27■■□□□ 1.48
SS18-218ENST00000581021 CRHR2Q13324 411 aa24.27■■□□□ 1.48
SS18-218ENST00000581021 FOXP4Q8IVH2 680 aaPredicted RBP24.27■■□□□ 1.48
SS18-218ENST00000581021 AFG3L2Q9Y4W6 797 aa24.27■■□□□ 1.48
SS18-218ENST00000581021 M0R2C6 588 aa24.26■■□□□ 1.47
SS18-218ENST00000581021 HLA-DOAP06340 250 aa24.26■■□□□ 1.47
SS18-218ENST00000581021 CRACR2BQ8N4Y2 399 aaPredicted RBP24.26■■□□□ 1.47
SS18-218ENST00000581021 APPBP2Q92624 585 aa24.26■■□□□ 1.47
SS18-218ENST00000581021 EHD4Q9H223 541 aa24.26■■□□□ 1.47
SS18-218ENST00000581021 PTPRFP10586 1907 aa24.25■■□□□ 1.47
SS18-218ENST00000581021 GDF11O95390 407 aa24.25■■□□□ 1.47
SS18-218ENST00000581021 ALDH1A1P00352 501 aa24.25■■□□□ 1.47
SS18-218ENST00000581021 PLEKHM2Q8IWE5 1019 aa24.25■■□□□ 1.47
SS18-218ENST00000581021 TNS4Q8IZW8 715 aa24.25■■□□□ 1.47
SS18-218ENST00000581021 ZNF296Q8WUU4 475 aaPredicted RBP24.25■■□□□ 1.47
SS18-218ENST00000581021 STRBPQ96SI9 672 aaKnown RBP24.25■■□□□ 1.47
SS18-218ENST00000581021 SEC62Q99442 399 aaKnown RBP24.25■■□□□ 1.47
SS18-218ENST00000581021 MCM9Q9NXL9 1143 aa24.25■■□□□ 1.47
SS18-218ENST00000581021 SERPINB13Q9UIV8 391 aa24.25■■□□□ 1.47
SS18-218ENST00000581021 BAZ2AQ9UIF9 1905 aaKnown RBP24.24■■□□□ 1.47
SS18-218ENST00000581021 CYP2D7A0A087X1C5 515 aa24.24■■□□□ 1.47
SS18-218ENST00000581021 GPR25O00155 361 aa24.24■■□□□ 1.47
SS18-218ENST00000581021 SHMT1P34896 483 aa24.24■■□□□ 1.47
SS18-218ENST00000581021 GABPAQ06546 454 aa24.24■■□□□ 1.47
SS18-218ENST00000581021 FSD1Q9BTV5 496 aa24.24■■□□□ 1.47
SS18-218ENST00000581021 A0A0G2JLL6 359 aaPredicted RBP24.23■■□□□ 1.47
SS18-218ENST00000581021 TRIM75PA6NK02 468 aa24.23■■□□□ 1.47
SS18-218ENST00000581021 CXCL11O14625 94 aa24.23■■□□□ 1.47
SS18-218ENST00000581021 PDE4AP27815 886 aa24.23■■□□□ 1.47
SS18-218ENST00000581021 GPAT2Q6NUI2 795 aa24.23■■□□□ 1.47
SS18-218ENST00000581021 TATDN1Q6P1N9 297 aa24.23■■□□□ 1.47
SS18-218ENST00000581021 PRRT2Q7Z6L0 340 aaPredicted RBP24.23■■□□□ 1.47
SS18-218ENST00000581021 SLC4A4Q9Y6R1 1079 aa24.23■■□□□ 1.47
SS18-218ENST00000581021 POLR3DP05423 398 aaPredicted RBP24.22■■□□□ 1.47
SS18-218ENST00000581021 ZFYP08048 801 aaPredicted RBP24.22■■□□□ 1.47
SS18-218ENST00000581021 NOM1Q5C9Z4 860 aaKnown RBP24.22■■□□□ 1.47
SS18-218ENST00000581021 TTC6Q86TZ1 520 aa24.22■■□□□ 1.47
SS18-218ENST00000581021 SLC44A5Q8NCS7 719 aa24.22■■□□□ 1.47
SS18-218ENST00000581021 ATP8A2Q9NTI2 1148 aa24.22■■□□□ 1.47
SS18-218ENST00000581021 ZBTB21Q9ULJ3 1066 aa24.22■■□□□ 1.47
SS18-218ENST00000581021 GPAA1O43292 621 aa24.21■■□□□ 1.47
SS18-218ENST00000581021 DGKZQ13574 1117 aa24.21■■□□□ 1.47
SS18-218ENST00000581021 ZMYM1Q5SVZ6 1142 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms