RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 ADARB2Q9NS39 739 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 SCAF8Q9UPN6 1271 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 SMARCA5O60264 1052 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 MCM6Q14566 821 aa11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 CAVIN4Q5BKX8 364 aa11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 MAP1SQ66K74 1059 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 DNAJC5GQ8N7S2 189 aa11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 SPSB2Q99619 263 aa11.66□□□□□ -0.54
NPLOC4-219ENST00000576713 ITGBL1O95965 494 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 CTDSPL2Q05D32 466 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 MFSD14BQ5SR56 506 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 ZBED3Q96IU2 234 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 GPR108Q9NPR9 543 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 SNRKQ9NRH2 765 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 AKAP2Q9Y2D5 859 aa11.65□□□□□ -0.54
NPLOC4-219ENST00000576713 H7C1D1 291 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 TRAF5O00463 557 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 TLL1O43897 1013 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 HMMRO75330 724 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 ARID4AP29374 1257 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 PRDX5P30044 214 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 MCAMP43121 646 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 HTRA3P83110 453 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 KIF4BQ2VIQ3 1234 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 DESI1Q6ICB0 168 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 FAM160A2Q8N612 972 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 ZNF384Q8TF68 577 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 TSC1Q92574 1164 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 DCTPP1Q9H773 170 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 PGAP2Q9UHJ9 254 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 NDUFB9Q9Y6M9 179 aa11.64□□□□□ -0.55
NPLOC4-219ENST00000576713 MYO3BQ8WXR4 1341 aa11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 MYH13Q9UKX3 1938 aa11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 IGHDP01880 384 aa11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 AACSQ86V21 672 aa11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 PNMA8AQ86V59 439 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 GLIS2Q9BZE0 524 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-219ENST00000576713 PASKQ96RG2 1323 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 ADM5C9JUS6 153 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 WNT10BO00744 389 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 FRAT2O75474 233 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 MSS51Q4VC12 460 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 CNTROBQ8N137 903 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 OTUD7AQ8TE49 926 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 KIF1BPQ96EK5 621 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 PRMT6Q96LA8 375 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 GGA3Q9NZ52 723 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
NPLOC4-219ENST00000576713 RAB11FIP3O75154 756 aa11.61□□□□□ -0.55
NPLOC4-219ENST00000576713 ADH1BP00325 375 aa11.61□□□□□ -0.55
NPLOC4-219ENST00000576713 CFAP100Q494V2 611 aa11.61□□□□□ -0.55
NPLOC4-219ENST00000576713 ANGEL2Q5VTE6 544 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-219ENST00000576713 ERC1Q8IUD2 1116 aa11.61□□□□□ -0.55
NPLOC4-219ENST00000576713 SPATA5Q8NB90 893 aa11.61□□□□□ -0.55
NPLOC4-219ENST00000576713 SALL1Q9NSC2 1324 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 CYP2E1P05181 493 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 ZAP70P43403 619 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 CRKP46108 304 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 HDAC1Q13547 482 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 GORABQ5T7V8 394 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 TSHZ3Q63HK5 1081 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 USP48Q86UV5 1035 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 MTMR14Q8NCE2 650 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 ANTXR1Q9H6X2 564 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 PIH1D3Q9NQM4 214 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-219ENST00000576713 CLRN2A0PK11 232 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 JUNDP17535 347 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 TTC39AQ5SRH9 613 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 PRAMEF18Q5VWM3 479 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 CST9Q5W186 159 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 WDR66Q8TBY9 1149 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 KLRG1Q96E93 195 aa11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 EDC3Q96F86 508 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 ZNF512BQ96KM6 892 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms