RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
NPLOC4-209ENST00000572760 HERC5Q9UII4 1024 aaKnown RBP17.31■□□□□ 0.36
NPLOC4-209ENST00000572760 SERPINB13Q9UIV8 391 aa17.31■□□□□ 0.36
NPLOC4-209ENST00000572760 FZD1Q9UP38 647 aa17.31■□□□□ 0.36
NPLOC4-209ENST00000572760 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
NPLOC4-209ENST00000572760 CYP2D7A0A087X1C5 515 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 UBE2Q2LH0YL09 131 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 USP2O75604 605 aaPredicted RBP17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 PLCD1P51178 756 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 ALX1Q15699 326 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 SBK1Q52WX2 424 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 C12orf60Q5U649 245 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 MOB2Q70IA6 237 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 IL25Q9H293 177 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 SSC5DA1L4H1 1573 aa17.3■□□□□ 0.36
NPLOC4-209ENST00000572760 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 TBC1D12O60347 775 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 FGAP02671 866 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 HUNKP57058 714 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 WRNIP1Q96S55 665 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 EHD4Q9H223 541 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 ANO2Q9NQ90 1003 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 CTNNA3Q9UI47 895 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 CSADQ9Y600 493 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
NPLOC4-209ENST00000572760 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
NPLOC4-209ENST00000572760 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
NPLOC4-209ENST00000572760 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
NPLOC4-209ENST00000572760 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
NPLOC4-209ENST00000572760 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
NPLOC4-209ENST00000572760 LAMA4Q16363 1823 aa17.28■□□□□ 0.36
NPLOC4-209ENST00000572760 DOCK1Q14185 1865 aa17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 FOXP2O15409 715 aa17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 HSPA6P17066 643 aa17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 PPARAQ07869 468 aa17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 MAP3K11Q16584 847 aa17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 PAXIP1Q6ZW49 1069 aaPredicted RBP17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 SWAP70Q9UH65 585 aa17.27■□□□□ 0.36
NPLOC4-209ENST00000572760 ZMYM6O95789 1325 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 ZNF213O14771 459 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 PTH1RQ03431 593 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 EVX2Q03828 476 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.357e-7■■■■□ 21.8
NPLOC4-209ENST00000572760 MKNK2Q9HBH9 465 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 ZNF287Q9HBT7 754 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 TAOK2Q9UL54 1235 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 TLL2Q9Y6L7 1015 aa17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
NPLOC4-209ENST00000572760 REC8O95072 547 aa17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 INPP5BP32019 993 aa17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 CDK8P49336 464 aa17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 HAND2P61296 217 aa17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 PDE4BQ07343 736 aa17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 IMMTQ16891 758 aaKnown RBP17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 METTL16Q86W50 562 aaKnown RBP17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 SLC10A4Q96EP9 437 aa17.25■□□□□ 0.35
NPLOC4-209ENST00000572760 UNCXA6NJT0 531 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 SMIM22K7EJ46 135 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 CTNND1O60716 968 aaKnown RBP17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 ZNF157P51786 506 aaPredicted RBP17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 CTDSPL2Q05D32 466 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 GABPAQ06546 454 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 CERKLQ49MI3 558 aaPredicted RBP17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 LDLRAD1Q5T700 205 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 RGMBQ6NW40 437 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 C16orf86Q6ZW13 317 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 LSG1Q9H089 658 aaKnown RBP17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 CABP5Q9NP86 173 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 PICK1Q9NRD5 415 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 TOMM22Q9NS69 142 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 ZNF112Q9UJU3 913 aa17.24■□□□□ 0.35
NPLOC4-209ENST00000572760 PHF20L1A8MW92 1017 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 MPHOSPH10O00566 681 aaKnown RBP17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 GDF11O95390 407 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 GRM1Q13255 1194 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 VGLL4Q14135 290 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 ZNF444Q8N0Y2 327 aaPredicted RBP17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 MAP4K1Q92918 833 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 CLMNQ96JQ2 1002 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 RBM8AQ9Y5S9 174 aaKnown RBP17.23■□□□□ 0.35
NPLOC4-209ENST00000572760 SHMT1P34896 483 aa17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 CAP2P40123 477 aa17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 HTRA3P83110 453 aa17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 TATDN1Q6P1N9 297 aa17.22■□□□□ 0.35
NPLOC4-209ENST00000572760 MFSD6Q6ZSS7 791 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms