RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 RNF20Q5VTR2 975 aa16.96■□□□□ 0.31
KLHDC4-222ENST00000568444 CREB3L3Q68CJ9 461 aa16.96■□□□□ 0.31
KLHDC4-222ENST00000568444 HOOK2Q96ED9 719 aa16.96■□□□□ 0.31
KLHDC4-222ENST00000568444 DYNLL2Q96FJ2 89 aa16.96■□□□□ 0.31
KLHDC4-222ENST00000568444 USP26Q9BXU7 913 aa16.96■□□□□ 0.31
KLHDC4-222ENST00000568444 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
KLHDC4-222ENST00000568444 SERPINB13Q9UIV8 391 aa16.96■□□□□ 0.31
KLHDC4-222ENST00000568444 ROBO3Q96MS0 1386 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 FAM196BA6NMK8 535 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 SMIM22K7EJ46 135 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 TRAF5O00463 557 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 SLC27A2O14975 620 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 EPB41L2O43491 1005 aaKnown RBP16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 MIGA2Q7L4E1 593 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 SMC1BQ8NDV3 1235 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 EHD4Q9H223 541 aa16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.95■□□□□ 0.3
KLHDC4-222ENST00000568444 SSC5DA1L4H1 1573 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 TOMM70O94826 608 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 CYP21A2P08686 494 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 SLURP2P0DP57 97 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 PDE4BQ07343 736 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 PRKG1Q13976 671 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 NECTIN1Q15223 517 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 DCAF15Q66K64 600 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 TOMM22Q9NS69 142 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 HERC5Q9UII4 1024 aaKnown RBP16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 ANAPC4Q9UJX5 808 aa16.94■□□□□ 0.3
KLHDC4-222ENST00000568444 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 HSPA4P34932 840 aa16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 FMR1Q06787 632 aaKnown RBP eCLIP16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 TTLL12Q14166 644 aaPredicted RBP16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 TBC1D10CQ8IV04 446 aa16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 FOXP4Q8IVH2 680 aaPredicted RBP16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 SLC44A5Q8NCS7 719 aa16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 MKNK2Q9HBH9 465 aa16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
KLHDC4-222ENST00000568444 PRDM1O75626 825 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 CDK8P49336 464 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 GABPAQ06546 454 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 RRP12Q5JTH9 1297 aaKnown RBP16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 AKNAD1Q5T1N1 836 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 MFSD6Q6ZSS7 791 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 ZNF341Q9BYN7 854 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 DNAJC18Q9H819 358 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 ZNF287Q9HBT7 754 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 FZD1Q9UP38 647 aa16.92■□□□□ 0.3
KLHDC4-222ENST00000568444 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
KLHDC4-222ENST00000568444 INCENPQ9NQS7 918 aa16.91■□□□□ 0.3
KLHDC4-222ENST00000568444 TAF6LQ9Y6J9 622 aa16.91■□□□□ 0.3
KLHDC4-222ENST00000568444 MYH8P13535 1937 aa16.91■□□□□ 0.3
KLHDC4-222ENST00000568444 NEDD4P46934 1319 aa16.91■□□□□ 0.3
KLHDC4-222ENST00000568444 E7EWF7 191 aa16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 PPP1R12BO60237 982 aaPredicted RBP16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 TBC1D12O60347 775 aa16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 ITGBL1O95965 494 aaPredicted RBP16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 SHMT1P34896 483 aa16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 TRDNQ13061 729 aa16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 RALYLQ86SE5 291 aaKnown RBP16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 METTL16Q86W50 562 aaKnown RBP16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 SNX14Q9Y5W7 946 aa16.9■□□□□ 0.3
KLHDC4-222ENST00000568444 MPHOSPH10O00566 681 aaKnown RBP16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 PCP11498 1178 aaKnown RBP16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 KRT32Q14532 448 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 IFFO2Q5TF58 517 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 STOX1Q6ZVD7 989 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 RASEFQ8IZ41 740 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 CNNM2Q9H8M5 875 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 ANGEL1Q9UNK9 670 aaKnown RBP16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 TACC3Q9Y6A5 838 aa16.89■□□□□ 0.29
KLHDC4-222ENST00000568444 PAPPA2Q9BXP8 1791 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 GDF11O95390 407 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 IREB2P48200 963 aaKnown RBP16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 MAP3K10Q02779 954 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 FSTL1Q12841 308 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 TATDN1Q6P1N9 297 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 ARMC9Q7Z3E5 817 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 KRT23Q9C075 422 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 TRPM7Q96QT4 1865 aa16.88■□□□□ 0.29
KLHDC4-222ENST00000568444 B4E1Z4 1266 aa16.87■□□□□ 0.29
KLHDC4-222ENST00000568444 ORC4O43929 436 aa16.87■□□□□ 0.29
KLHDC4-222ENST00000568444 USP2O75604 605 aaPredicted RBP16.87■□□□□ 0.29
KLHDC4-222ENST00000568444 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
KLHDC4-222ENST00000568444 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
KLHDC4-222ENST00000568444 RASA1P20936 1047 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms