RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 SDSP20132 328 aa17.7■□□□□ 0.42
SCAMP2-203ENST00000563663 INPP5BP32019 993 aa17.7■□□□□ 0.42
SCAMP2-203ENST00000563663 GJA5P36382 358 aa17.7■□□□□ 0.42
SCAMP2-203ENST00000563663 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-203ENST00000563663 SAP30BPQ9UHR5 308 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-203ENST00000563663 SNCAIPQ9Y6H5 919 aa17.7■□□□□ 0.42
SCAMP2-203ENST00000563663 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
SCAMP2-203ENST00000563663 GSG1L2A8MUP6 293 aa17.69■□□□□ 0.42
SCAMP2-203ENST00000563663 PLCD1P51178 756 aa17.69■□□□□ 0.42
SCAMP2-203ENST00000563663 TTLL12Q14166 644 aaPredicted RBP17.69■□□□□ 0.42
SCAMP2-203ENST00000563663 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
SCAMP2-203ENST00000563663 IL25Q9H293 177 aa17.69■□□□□ 0.42
SCAMP2-203ENST00000563663 DHX36Q9H2U1 1008 aaKnown RBP17.69■□□□□ 0.42
SCAMP2-203ENST00000563663 TRIM6-TRIM34B2RNG4 842 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 IREB2P48200 963 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 GABPAQ06546 454 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 DCAF15Q66K64 600 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 ZSCAN29Q8IWY8 852 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 WRNIP1Q96S55 665 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 ZNF341Q9BYN7 854 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 PI4KBQ9UBF8 816 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 AOC2O75106 756 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 USP5P45974 858 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 NMIQ13287 307 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 BMP2KLQ5H9B9 411 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 CCDC129Q6ZRS4 1044 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 ZNF589Q86UQ0 364 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 ANKRD13AQ8IZ07 590 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 HOOK2Q96ED9 719 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 ATP8A2Q9NTI2 1148 aa17.68■□□□□ 0.42
SCAMP2-203ENST00000563663 MYH8P13535 1937 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 CYP2D6P10635 497 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 ZNF157P51786 506 aaPredicted RBP17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 JAG1P78504 1218 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 MAP3K9P80192 1104 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 SLC4A8Q2Y0W8 1093 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 RILPL2Q969X0 211 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 EHD4Q9H223 541 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 SLC4A4Q9Y6R1 1079 aa17.67■□□□□ 0.42
SCAMP2-203ENST00000563663 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-203ENST00000563663 SHROOM1Q2M3G4 852 aaPredicted RBP17.66■□□□□ 0.42
SCAMP2-203ENST00000563663 VPS53Q5VIR6 699 aa17.66■□□□□ 0.42
SCAMP2-203ENST00000563663 SPRYD7Q5W111 196 aa17.66■□□□□ 0.42
SCAMP2-203ENST00000563663 HELLSQ9NRZ9 838 aa17.66■□□□□ 0.42
SCAMP2-203ENST00000563663 HERC5Q9UII4 1024 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-203ENST00000563663 GREB1LQ9C091 1923 aaPredicted RBP17.66■□□□□ 0.42
SCAMP2-203ENST00000563663 CYP2D7A0A087X1C5 515 aa17.65■□□□□ 0.42
SCAMP2-203ENST00000563663 ECE1P42892 770 aa17.65■□□□□ 0.42
SCAMP2-203ENST00000563663 CCDC102AQ96A19 550 aa17.65■□□□□ 0.42
SCAMP2-203ENST00000563663 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
SCAMP2-203ENST00000563663 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
SCAMP2-203ENST00000563663 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.65■□□□□ 0.42
SCAMP2-203ENST00000563663 LAMA4Q16363 1823 aa17.64■□□□□ 0.42
SCAMP2-203ENST00000563663 SPDYE5A6NIY4 337 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 SHMT1P34896 483 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 SLC4A3P48751 1232 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 NOGQ13253 232 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 TATDN1Q6P1N9 297 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 GIMAP6Q6P9H5 292 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 CTR9Q6PD62 1173 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 FOXP4Q8IVH2 680 aaPredicted RBP17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 ELP3Q9H9T3 547 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 ROBO3Q96MS0 1386 aa17.64■□□□□ 0.41
SCAMP2-203ENST00000563663 USP17L12C9JPN9 530 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 USP17L21D6R901 530 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 MCMDC2Q4G0Z9 681 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 SERPINB13Q9UIV8 391 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 GNAT2P19087 354 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 DEKP35659 375 aaKnown RBP17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 MAP2K2P36507 400 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 SBK1Q52WX2 424 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 PAXIP1Q6ZW49 1069 aaPredicted RBP17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 SLC44A5Q8NCS7 719 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 OPTNQ96CV9 577 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 C22orf23Q9BZE7 217 aa17.63■□□□□ 0.41
SCAMP2-203ENST00000563663 PATL2C9JE40 543 aaKnown RBP17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 ZBTB48P10074 688 aaPredicted RBP17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 GRM1Q13255 1194 aa17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 IFNL3Q8IZI9 196 aa17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 SLC10A4Q96EP9 437 aa17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 MS4A4AQ96JQ5 239 aa17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
SCAMP2-203ENST00000563663 HLA-DOAP06340 250 aa17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 CHMLP26374 656 aa17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 CAP2P40123 477 aa17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 KIF23Q02241 960 aaPredicted RBP17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 CWC27Q6UX04 472 aaKnown RBP17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 TTC6Q86TZ1 520 aa17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 DYNLL2Q96FJ2 89 aa17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 CSADQ9Y600 493 aa17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 PTPRAP18433 802 aa17.61■□□□□ 0.41
SCAMP2-203ENST00000563663 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms