RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 TEPSINQ96N21 525 aa6.78□□□□□ -1.32
LINC01963-201ENST00000562038 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
LINC01963-201ENST00000562038 ARPP21Q9UBL0 812 aaPredicted RBP6.78□□□□□ -1.32
LINC01963-201ENST00000562038 EXOC6BQ9Y2D4 811 aa6.78□□□□□ -1.32
LINC01963-201ENST00000562038 DDNO94850 711 aaPredicted RBP6.78□□□□□ -1.32
LINC01963-201ENST00000562038 MECOMQ03112 1051 aa6.78□□□□□ -1.32
LINC01963-201ENST00000562038 RCSD1Q6JBY9 416 aa6.78□□□□□ -1.32
LINC01963-201ENST00000562038 FOXP4Q8IVH2 680 aaPredicted RBP6.78□□□□□ -1.32
LINC01963-201ENST00000562038 NOL10Q9BSC4 688 aaKnown RBP6.78□□□□□ -1.32
LINC01963-201ENST00000562038 TTF2Q9UNY4 1162 aaKnown RBP6.78□□□□□ -1.32
LINC01963-201ENST00000562038 PDE6AP16499 860 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 HIRAP54198 1017 aaPredicted RBP6.77□□□□□ -1.33
LINC01963-201ENST00000562038 MAPK8IP2Q13387 824 aaPredicted RBP6.77□□□□□ -1.33
LINC01963-201ENST00000562038 DOK7Q18PE1 504 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 CCDC178Q5BJE1 867 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 GORABQ5T7V8 394 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 KCNB2Q92953 911 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 DSCC1Q9BVC3 393 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 SIL1Q9H173 461 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 POLR2AP24928 1970 aaKnown RBP6.77□□□□□ -1.33
LINC01963-201ENST00000562038 IGHDP01880 384 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 NF2P35240 595 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 INHBEP58166 350 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 SCARF1Q14162 830 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 NAA16Q6N069 864 aaPredicted RBP6.77□□□□□ -1.33
LINC01963-201ENST00000562038 RGMBQ6NW40 437 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 DZIP1Q86YF9 867 aaKnown RBP6.77□□□□□ -1.33
LINC01963-201ENST00000562038 ZNF384Q8TF68 577 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 C1QTNF1Q9BXJ1 281 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 PIH1D3Q9NQM4 214 aaKnown RBP6.77□□□□□ -1.33
LINC01963-201ENST00000562038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.77□□□□□ -1.33
LINC01963-201ENST00000562038 NID2Q14112 1375 aa6.77□□□□□ -1.33
LINC01963-201ENST00000562038 RIMBP2O15034 1052 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 TIMM10P62072 90 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 TATDN1Q6P1N9 297 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 FBXL16Q8N461 479 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 ZNF333Q96JL9 665 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 CRNKL1Q9BZJ0 848 aaKnown RBP6.76□□□□□ -1.33
LINC01963-201ENST00000562038 MYPNQ86TC9 1320 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 WDHD1O75717 1129 aaPredicted RBP6.76□□□□□ -1.33
LINC01963-201ENST00000562038 RAD17O75943 681 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 ZAP70P43403 619 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 GABPAQ06546 454 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 CDC42EP5Q6NZY7 148 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 HELBQ8NG08 1087 aaPredicted RBP6.76□□□□□ -1.33
LINC01963-201ENST00000562038 TRPM4Q8TD43 1214 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 RUFY2Q8WXA3 655 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 SGSM3Q96HU1 749 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 C12orf42Q96LP6 360 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 CCDC85AQ96PX6 553 aaPredicted RBP6.76□□□□□ -1.33
LINC01963-201ENST00000562038 ZNF341Q9BYN7 854 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 ZNF287Q9HBT7 754 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 TCP11L1Q9NUJ3 509 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 TLR7Q9NYK1 1049 aaKnown RBP6.76□□□□□ -1.33
LINC01963-201ENST00000562038 H0YGN5 161 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 BRD1O95696 1058 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 EPS15P42566 896 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 PRMT2P55345 433 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 TSGA10IPQ3SY00 556 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 SULF1Q8IWU6 871 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 CCDC17Q96LX7 622 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 WDR18Q9BV38 432 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 PNMA2Q9UL42 364 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 KCNH4Q9UQ05 1017 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 RLFQ13129 1914 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 MGAMO43451 1857 aa6.76□□□□□ -1.33
LINC01963-201ENST00000562038 ORC4O43929 436 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 RCAN1P53805 252 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 ARMC9Q7Z3E5 817 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 CDCA5Q96FF9 252 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 CTNND1O60716 968 aaKnown RBP6.75□□□□□ -1.33
LINC01963-201ENST00000562038 PLA2G6O60733 806 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 GNRH1P01148 92 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 BTDP43251 543 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 TTC6Q86TZ1 520 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC01963-201ENST00000562038 ANKS1AQ92625 1134 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 NEUROD6Q96NK8 337 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 PLCD4Q9BRC7 762 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 MYH4Q9Y623 1939 aa6.75□□□□□ -1.33
LINC01963-201ENST00000562038 FLT1P17948 1338 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 MAGEB6P1A0A0J9YX57 407 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 ALDH1A1P00352 501 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 PDE4AP27815 886 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 IREB2P48200 963 aaKnown RBP6.74□□□□□ -1.33
LINC01963-201ENST00000562038 PPIL2Q13356 520 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 LBX2Q6XYB7 198 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 PI4KBQ9UBF8 816 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 FAM198AQ9UFP1 575 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 CXCL11O14625 94 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 PPATQ06203 517 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 STRBPQ96SI9 672 aaKnown RBP6.74□□□□□ -1.33
LINC01963-201ENST00000562038 GZF1Q9H116 711 aaPredicted RBP6.74□□□□□ -1.33
LINC01963-201ENST00000562038 GGA3Q9NZ52 723 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 LRP2BPQ9P2M1 347 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 BAZ2AQ9UIF9 1905 aaKnown RBP6.74□□□□□ -1.33
LINC01963-201ENST00000562038 SPDYE5A6NIY4 337 aa6.74□□□□□ -1.33
LINC01963-201ENST00000562038 PATL2C9JE40 543 aaKnown RBP6.74□□□□□ -1.33
LINC01963-201ENST00000562038 PRDX5P30044 214 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms