RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PUS7LQ9H0K6 701 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-219ENST00000560871 ZNF112Q9UJU3 913 aa18.71■□□□□ 0.59
RABGGTA-219ENST00000560871 GPR25O00155 361 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 MBD4O95243 580 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 ZFYP08048 801 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 ZSCAN29Q8IWY8 852 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 ZNF296Q8WUU4 475 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 APPBP2Q92624 585 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 WRNIP1Q96S55 665 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 R3HDMLQ9H3Y0 253 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 ARMT1Q9H993 441 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 CSADQ9Y600 493 aa18.7■□□□□ 0.58
RABGGTA-219ENST00000560871 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 USP5P45974 858 aa18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 OSBP2Q969R2 916 aa18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 EVI5LQ96CN4 794 aa18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 MS4A4AQ96JQ5 239 aa18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 DHX36Q9H2U1 1008 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
RABGGTA-219ENST00000560871 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 PHF20L1A8MW92 1017 aa18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 TBC1D12O60347 775 aa18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 NEFLP07196 543 aa18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 INPP5BP32019 993 aa18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 CENPQQ7L2Z9 268 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 CTU1Q7Z7A3 348 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 METTL16Q86W50 562 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 SDR42E1Q8WUS8 393 aa18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 PTPN18Q99952 460 aa18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 CRNKL1Q9BZJ0 848 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-219ENST00000560871 CCDC85CA6NKD9 419 aa18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 FAM196BA6NMK8 535 aa18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 LRRFIP1Q32MZ4 808 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 NOL9Q5SY16 702 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 OTUD7BQ6GQQ9 843 aa18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 ZKSCAN4Q969J2 545 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 DNAJC18Q9H819 358 aa18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 PALD1Q9ULE6 856 aa18.67■□□□□ 0.58
RABGGTA-219ENST00000560871 MYH1P12882 1939 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 M0R2C6 588 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 PRKAB2O43741 272 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 GTF2A2P52657 109 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 ZMYM1Q5SVZ6 1142 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 ERO1BQ86YB8 467 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 OTUD5Q96G74 571 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 SEC62Q99442 399 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 SAP30BPQ9UHR5 308 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 HERC5Q9UII4 1024 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 DOCK1Q14185 1865 aa18.66■□□□□ 0.58
RABGGTA-219ENST00000560871 FKTNO75072 461 aa18.65■□□□□ 0.58
RABGGTA-219ENST00000560871 GSPT1P15170 499 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-219ENST00000560871 TICAM2Q86XR7 235 aa18.65■□□□□ 0.58
RABGGTA-219ENST00000560871 BRI3BPQ8WY22 251 aa18.65■□□□□ 0.58
RABGGTA-219ENST00000560871 STRBPQ96SI9 672 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-219ENST00000560871 GPAA1O43292 621 aa18.64■□□□□ 0.57
RABGGTA-219ENST00000560871 HLA-DOAP06340 250 aa18.64■□□□□ 0.57
RABGGTA-219ENST00000560871 SLC4A8Q2Y0W8 1093 aa18.64■□□□□ 0.57
RABGGTA-219ENST00000560871 EHD4Q9H223 541 aa18.64■□□□□ 0.57
RABGGTA-219ENST00000560871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.64■□□□□ 0.57
RABGGTA-219ENST00000560871 ATP8A2Q9NTI2 1148 aa18.64■□□□□ 0.57
RABGGTA-219ENST00000560871 CCL15-CCL14A0A0B4J2E2 113 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 PPATQ06203 517 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 PPIL2Q13356 520 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 RRP1BQ14684 758 aaKnown RBP18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 CCL15Q16663 113 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 TTC22Q5TAA0 569 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 SCYL3Q8IZE3 742 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 SLC4A4Q9Y6R1 1079 aa18.63■□□□□ 0.57
RABGGTA-219ENST00000560871 PLCD1P51178 756 aa18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 EVX2Q03828 476 aa18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 CRHR2Q13324 411 aa18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 PKN2Q16513 984 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 CCDC136Q96JN2 1154 aa18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 EPB41L4AQ9HCS5 686 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 MCM9Q9NXL9 1143 aa18.62■□□□□ 0.57
RABGGTA-219ENST00000560871 ATAD5Q96QE3 1844 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 IRF6O14896 467 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 CETPP11597 493 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 GABPAQ06546 454 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 ERICH6BQ5W0A0 696 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 TTC6Q86TZ1 520 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 SERPINB13Q9UIV8 391 aa18.61■□□□□ 0.57
RABGGTA-219ENST00000560871 FOXP2O15409 715 aa18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 CYP2D6P10635 497 aa18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 GNAT2P19087 354 aa18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 RGS19P49795 217 aa18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 FAM43AQ8N2R8 423 aa18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 FAM227BQ96M60 508 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms