RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 SH3BP5LQ7L8J4 393 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 CDCA5Q96FF9 252 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 TEPSINQ96N21 525 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 USP26Q9BXU7 913 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.033e-6■■■■□ 20.7
ABCD4-223ENST00000555904 TOMM22Q9NS69 142 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
ABCD4-223ENST00000555904 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 SLC27A2O14975 620 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 PPP1R12BO60237 982 aaPredicted RBP14.84□□□□□ -0.03
ABCD4-223ENST00000555904 SEC24BO95487 1268 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 HSPA4P34932 840 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 TRDNQ13061 729 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 KRT32Q14532 448 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 NECTIN1Q15223 517 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 NBPF12Q5TAG4 269 aaPredicted RBP14.84□□□□□ -0.03
ABCD4-223ENST00000555904 PRAMEF18Q5VWM3 479 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 CREB3L3Q68CJ9 461 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 MFSD6Q6ZSS7 791 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 RALYLQ86SE5 291 aaKnown RBP14.84□□□□□ -0.03
ABCD4-223ENST00000555904 STK11IPQ8N1F8 1099 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 RBM46Q8TBY0 533 aaKnown RBP14.84□□□□□ -0.03
ABCD4-223ENST00000555904 CNNM2Q9H8M5 875 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 ZNF408Q9H9D4 720 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 MKNK2Q9HBH9 465 aa14.84□□□□□ -0.03
ABCD4-223ENST00000555904 LAMB1P07942 1786 aa14.83□□□□□ -0.03
ABCD4-223ENST00000555904 TBC1D12O60347 775 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 CYP21A2P08686 494 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 CTDSPL2Q05D32 466 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 TTLL12Q14166 644 aaPredicted RBP14.83□□□□□ -0.04
ABCD4-223ENST00000555904 AKNAD1Q5T1N1 836 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 C16orf86Q6ZW13 317 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 STAG1Q8WVM7 1258 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 DYNLL2Q96FJ2 89 aa14.83□□□□□ -0.04
ABCD4-223ENST00000555904 TRAF5O00463 557 aa14.82□□□□□ -0.04
ABCD4-223ENST00000555904 NT5C2P49902 561 aa14.82□□□□□ -0.04
ABCD4-223ENST00000555904 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
ABCD4-223ENST00000555904 ZNF341Q9BYN7 854 aa14.82□□□□□ -0.04
ABCD4-223ENST00000555904 C22orf23Q9BZE7 217 aa14.82□□□□□ -0.04
ABCD4-223ENST00000555904 KRT23Q9C075 422 aa14.82□□□□□ -0.04
ABCD4-223ENST00000555904 MYH1P12882 1939 aa14.82□□□□□ -0.04
ABCD4-223ENST00000555904 LAMA4Q16363 1823 aa14.81□□□□□ -0.04
ABCD4-223ENST00000555904 IREB2P48200 963 aaKnown RBP14.81□□□□□ -0.04
ABCD4-223ENST00000555904 CDK8P49336 464 aa14.81□□□□□ -0.04
ABCD4-223ENST00000555904 GABPAQ06546 454 aa14.81□□□□□ -0.04
ABCD4-223ENST00000555904 FSTL1Q12841 308 aa14.81□□□□□ -0.04
ABCD4-223ENST00000555904 RRP12Q5JTH9 1297 aaKnown RBP14.81□□□□□ -0.04
ABCD4-223ENST00000555904 METTL16Q86W50 562 aaKnown RBP14.81□□□□□ -0.04
ABCD4-223ENST00000555904 TBC1D10CQ8IV04 446 aa14.81□□□□□ -0.04
ABCD4-223ENST00000555904 ZNF444Q8N0Y2 327 aaPredicted RBP14.81□□□□□ -0.04
ABCD4-223ENST00000555904 ESR2Q92731 530 aa14.81□□□□□ -0.04
ABCD4-223ENST00000555904 BAZ2AQ9UIF9 1905 aaKnown RBP14.8□□□□□ -0.04
ABCD4-223ENST00000555904 FAM196BA6NMK8 535 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 E7EWF7 191 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 MPHOSPH10O00566 681 aaKnown RBP14.8□□□□□ -0.04
ABCD4-223ENST00000555904 CELF2O95319 508 aaKnown RBP14.8□□□□□ -0.04
ABCD4-223ENST00000555904 PSMA5P28066 241 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 ANAPC15P60006 121 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 FKBP1BP68106 108 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 EVX2Q03828 476 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 PRKG1Q13976 671 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 CERKLQ49MI3 558 aaPredicted RBP14.8□□□□□ -0.04
ABCD4-223ENST00000555904 ARMC9Q7Z3E5 817 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 C2orf69Q8N8R5 385 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 SLC44A5Q8NCS7 719 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 NCOA7Q8NI08 942 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 CCDC17Q96LX7 622 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 WRNIP1Q96S55 665 aa14.8□□□□□ -0.04
ABCD4-223ENST00000555904 SSC5DA1L4H1 1573 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 TSPY2A6NKD2 308 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 ORC4O43929 436 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 RANBP6O60518 1105 aaKnown RBP14.79□□□□□ -0.04
ABCD4-223ENST00000555904 PRDM1O75626 825 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 ITGBL1O95965 494 aaPredicted RBP14.79□□□□□ -0.04
ABCD4-223ENST00000555904 HMGB1P09429 215 aaKnown RBP14.79□□□□□ -0.04
ABCD4-223ENST00000555904 TSPY3P0CV98 308 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 TSPY8P0CW00 308 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 NEDD4P46934 1319 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 MAP3K10Q02779 954 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 TSGA10IPQ3SY00 556 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 DLK2Q6UY11 383 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 NBPF3Q9H094 633 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 DNAJC18Q9H819 358 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 CABP5Q9NP86 173 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 ANGEL1Q9UNK9 670 aaKnown RBP14.79□□□□□ -0.04
ABCD4-223ENST00000555904 SNX14Q9Y5W7 946 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 CSADQ9Y600 493 aa14.79□□□□□ -0.04
ABCD4-223ENST00000555904 SMIM22K7EJ46 135 aa14.78□□□□□ -0.04
ABCD4-223ENST00000555904 CTNND1O60716 968 aaKnown RBP14.78□□□□□ -0.04
ABCD4-223ENST00000555904 FGRP09769 529 aa14.78□□□□□ -0.04
ABCD4-223ENST00000555904 SHMT1P34896 483 aa14.78□□□□□ -0.04
ABCD4-223ENST00000555904 ABCB5Q2M3G0 1257 aa14.78□□□□□ -0.04
ABCD4-223ENST00000555904 JAKMIP1Q96N16 626 aaKnown RBP14.78□□□□□ -0.04
ABCD4-223ENST00000555904 NEK1Q96PY6 1258 aa14.78□□□□□ -0.04
ABCD4-223ENST00000555904 GBA2Q9HCG7 927 aaPredicted RBP14.78□□□□□ -0.04
ABCD4-223ENST00000555904 PICK1Q9NRD5 415 aa14.78□□□□□ -0.04
ABCD4-223ENST00000555904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
ABCD4-223ENST00000555904 B4E1Z4 1266 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms