RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 C12orf50Q8NA57 414 aaPredicted RBP8.26□□□□□ -1.09
CKS1BP1-201ENST00000555221 PMFBP1Q8TBY8 1022 aa8.26□□□□□ -1.09
CKS1BP1-201ENST00000555221 LENG1Q96BZ8 264 aaPredicted RBP8.26□□□□□ -1.09
CKS1BP1-201ENST00000555221 WNT10AQ9GZT5 417 aa8.26□□□□□ -1.09
CKS1BP1-201ENST00000555221 MEIS3P2A8K0S8 358 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 GRK4P32298 578 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 NRG1Q02297 640 aaPredicted RBP8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 TMEM201Q5SNT2 666 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 ZBTB37Q5TC79 503 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 ANKS3Q6ZW76 656 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 RNF214Q8ND24 703 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 AKTIPQ9H8T0 292 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 GMIPQ9P107 970 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 REV1Q9UBZ9 1251 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 USP21Q9UK80 565 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 CORINQ9Y5Q5 1042 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 SHROOM4Q9ULL8 1493 aa8.25□□□□□ -1.09
CKS1BP1-201ENST00000555221 C9orf172C9J069 976 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 TIAF1O95411 115 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 APBA3O96018 575 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 PGRP06401 933 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 GRIK4Q16099 956 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 PPM1JQ5JR12 505 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 SHISA2Q6UWI4 295 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 DYMQ7RTS9 669 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 LSRQ86X29 649 aaPredicted RBP8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 KCT2Q8NC54 265 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 ZNF507Q8TCN5 953 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 TMEM40Q8WWA1 233 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 TM9SF2Q99805 663 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 TRIM55Q9BYV6 548 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 CEP41Q9BYV8 373 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 PIDD1Q9HB75 910 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 DISC1Q9NRI5 854 aa8.24□□□□□ -1.09
CKS1BP1-201ENST00000555221 U2SURPO15042 1029 aaKnown RBP8.23□□□□□ -1.09
CKS1BP1-201ENST00000555221 SMAD7O15105 426 aaKnown RBP8.23□□□□□ -1.09
CKS1BP1-201ENST00000555221 AGGF1Q8N302 714 aaeCLIP8.23□□□□□ -1.09
CKS1BP1-201ENST00000555221 C19orf47Q8N9M1 422 aaKnown RBP8.23□□□□□ -1.09
CKS1BP1-201ENST00000555221 OSBPL2Q9H1P3 480 aa8.23□□□□□ -1.09
CKS1BP1-201ENST00000555221 LOC105371045A0A1W2PR82 267 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 KLF4O43474 513 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 RAB33AQ14088 237 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 CCDC144BQ3MJ40 725 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 CDC37L1Q7L3B6 337 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 HID1Q8IV36 788 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 FAM169BQ8N8A8 192 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 GSX1Q9H4S2 264 aaPredicted RBP8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 ACTR10Q9NZ32 417 aa8.22□□□□□ -1.09
CKS1BP1-201ENST00000555221 SART1O43290 800 aaKnown RBP8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 DRD2P14416 443 aa8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 ASPAP45381 313 aa8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 YARSP54577 528 aaKnown RBP8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 CASP7P55210 303 aa8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 TTLL4Q14679 1199 aa8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 OVOS1Q6IE37 1185 aa8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 Q6ZS46 218 aa8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 TAB3Q8N5C8 712 aaPredicted RBP8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 HNRNPLLQ8WVV9 542 aaKnown RBP8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 SIRPGQ9P1W8 387 aa8.21□□□□□ -1.1
CKS1BP1-201ENST00000555221 FAM181BA6NEQ2 426 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 SLC22A31A6NKX4 558 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 GLB1P16278 677 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 GUCY2CP25092 1073 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 COL8A1P27658 744 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 NFE2L2Q16236 605 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 CDCP2Q5VXM1 449 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 SLC6A19Q695T7 634 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 NLRC3Q7RTR2 1065 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 NOP9Q86U38 636 aaKnown RBP8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 MCATQ8IVS2 390 aaKnown RBP8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 C2CD4AQ8NCU7 369 aaPredicted RBP8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 ACSF2Q96CM8 615 aaPredicted RBP8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 ZSWIM4Q9H7M6 989 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 KLHL3Q9UH77 587 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 ACTL7BQ9Y614 415 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 SLC12A7Q9Y666 1083 aa8.2□□□□□ -1.1
CKS1BP1-201ENST00000555221 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 GAS2O43903 313 aaKnown RBP8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 RNGTTO60942 597 aaKnown RBP8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 ALX3O95076 343 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 NEFMP07197 916 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 HCLS1P14317 486 aaPredicted RBP8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 NTF4P34130 210 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 SERINC3Q13530 473 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 PPP2R5EQ16537 467 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 INTS3Q68E01 1043 aaKnown RBP8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 MKL1Q969V6 931 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 ATG4CQ96DT6 458 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 TMEM87BQ96K49 555 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 YIPF2Q9BWQ6 316 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 CNNM2Q9H8M5 875 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 SSU72Q9NP77 194 aaKnown RBP8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 FAM105AQ9NUU6 356 aa8.19□□□□□ -1.1
CKS1BP1-201ENST00000555221 NME1P15531 152 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms