RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 CYB5R4Q7L1T6 521 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 IQCA1Q86XH1 822 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 FOXP4Q8IVH2 680 aaPredicted RBP12.8□□□□□ -0.36
PABPN1-203ENST00000553960 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 BRF1Q92994 677 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
PABPN1-203ENST00000553960 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
PABPN1-203ENST00000553960 BCS1LQ9Y276 419 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 B4E1Z4 1266 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 TBC1D12O60347 775 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 KDM4AO75164 1064 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
PABPN1-203ENST00000553960 CPA1P15085 419 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 SLC4A3P48751 1232 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 APOA5Q6Q788 366 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 USP40Q9NVE5 1235 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 JAG2Q9Y219 1238 aa12.79□□□□□ -0.36
PABPN1-203ENST00000553960 CCDC196A0A1B0GTZ2 297 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 DDAH1O94760 285 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 BRD1O95696 1058 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 CALM1P0DP23 149 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 CALM2P0DP24 149 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 CALM3P0DP25 149 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 SMARCA1P28370 1054 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 CTDSPL2Q05D32 466 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 ZSCAN10Q96SZ4 725 aaPredicted RBP12.78□□□□□ -0.36
PABPN1-203ENST00000553960 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
PABPN1-203ENST00000553960 PI4KBQ9UBF8 816 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
PABPN1-203ENST00000553960 IGKV6D-41A0A0C4DH26 115 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 ERICH2A1L162 156 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 LARGE1O95461 756 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 RASA1P20936 1047 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 PRELPP51888 382 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.37
PABPN1-203ENST00000553960 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 GPC2Q8N158 579 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 FAM151AQ8WW52 585 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 DDX4Q9NQI0 724 aaKnown RBP12.77□□□□□ -0.37
PABPN1-203ENST00000553960 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
PABPN1-203ENST00000553960 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 PGAP2Q9UHJ9 254 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
PABPN1-203ENST00000553960 SERPINB13Q9UIV8 391 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
PABPN1-203ENST00000553960 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
PABPN1-203ENST00000553960 CDKL5O76039 1030 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 POLR3DP05423 398 aaPredicted RBP12.76□□□□□ -0.37
PABPN1-203ENST00000553960 HLA-DOAP06340 250 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 IFNAR1P17181 557 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 CDK8P49336 464 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 PLCD1P51178 756 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 SCRN1Q12765 414 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 TROAPQ12815 778 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 DLGAP5Q15398 846 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 NTRK3Q16288 839 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 ENAHQ8N8S7 591 aaPredicted RBP12.76□□□□□ -0.37
PABPN1-203ENST00000553960 PRMT6Q96LA8 375 aaPredicted RBP12.76□□□□□ -0.37
PABPN1-203ENST00000553960 UBAC1Q9BSL1 405 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 MXD3Q9BW11 206 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 BRPF3Q9ULD4 1205 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 WDR33Q9C0J8 1336 aaKnown RBP12.76□□□□□ -0.37
PABPN1-203ENST00000553960 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
PABPN1-203ENST00000553960 RAD17O75943 681 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 MYH8P13535 1937 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 SCNN1DP51172 638 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 FGD1P98174 961 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 APOBRQ0VD83 1088 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 WTAPQ15007 396 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 NSUN7Q8NE18 718 aaKnown RBP12.75□□□□□ -0.37
PABPN1-203ENST00000553960 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
PABPN1-203ENST00000553960 FAM217BQ9NTX9 383 aaPredicted RBP12.75□□□□□ -0.37
PABPN1-203ENST00000553960 TNKSO95271 1327 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 PITPNM2Q9BZ72 1349 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 KLF18A0A0U1RQI7 1052 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 ZBTB43O43298 467 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 PTMSP20962 102 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 TNFAIP1Q13829 316 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 CPLX2Q6PUV4 134 aaKnown RBP12.74□□□□□ -0.37
PABPN1-203ENST00000553960 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
PABPN1-203ENST00000553960 MKL1Q969V6 931 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
PABPN1-203ENST00000553960 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
PABPN1-203ENST00000553960 TMOD2Q9NZR1 351 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms