RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 USP5P45974 858 aa13.12□□□□□ -0.31
CNOT2-239ENST00000552483 SHROOM1Q2M3G4 852 aaPredicted RBP13.12□□□□□ -0.31
CNOT2-239ENST00000552483 CCDC84Q86UT8 332 aaPredicted RBP13.12□□□□□ -0.31
CNOT2-239ENST00000552483 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
CNOT2-239ENST00000552483 HOOK2Q96ED9 719 aa13.12□□□□□ -0.31
CNOT2-239ENST00000552483 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
CNOT2-239ENST00000552483 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
CNOT2-239ENST00000552483 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
CNOT2-239ENST00000552483 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
CNOT2-239ENST00000552483 UNCXA6NJT0 531 aa13.11□□□□□ -0.31
CNOT2-239ENST00000552483 JAG1P78504 1218 aa13.11□□□□□ -0.31
CNOT2-239ENST00000552483 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
CNOT2-239ENST00000552483 ZSCAN25Q6NSZ9 544 aa13.11□□□□□ -0.31
CNOT2-239ENST00000552483 APPBP2Q92624 585 aa13.11□□□□□ -0.31
CNOT2-239ENST00000552483 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
CNOT2-239ENST00000552483 CRNKL1Q9BZJ0 848 aaKnown RBP13.11□□□□□ -0.31
CNOT2-239ENST00000552483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■□□ 19.1
CNOT2-239ENST00000552483 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-239ENST00000552483 CSADQ9Y600 493 aa13.11□□□□□ -0.31
CNOT2-239ENST00000552483 CYP2D7A0A087X1C5 515 aa13.1□□□□□ -0.31
CNOT2-239ENST00000552483 TBC1D12O60347 775 aa13.1□□□□□ -0.31
CNOT2-239ENST00000552483 PLCD1P51178 756 aa13.1□□□□□ -0.31
CNOT2-239ENST00000552483 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
CNOT2-239ENST00000552483 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
CNOT2-239ENST00000552483 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
CNOT2-239ENST00000552483 STRBPQ96SI9 672 aaKnown RBP13.1□□□□□ -0.31
CNOT2-239ENST00000552483 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
CNOT2-239ENST00000552483 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNOT2-239ENST00000552483 GPAA1O43292 621 aa13.09□□□□□ -0.31
CNOT2-239ENST00000552483 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
CNOT2-239ENST00000552483 HSPA8P11142 646 aaKnown RBP13.09□□□□□ -0.31
CNOT2-239ENST00000552483 GSPT1P15170 499 aaKnown RBP13.09□□□□□ -0.31
CNOT2-239ENST00000552483 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
CNOT2-239ENST00000552483 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
CNOT2-239ENST00000552483 SCYL3Q8IZE3 742 aa13.09□□□□□ -0.31
CNOT2-239ENST00000552483 AIDAQ96BJ3 306 aa13.09□□□□□ -0.31
CNOT2-239ENST00000552483 EVI5LQ96CN4 794 aa13.09□□□□□ -0.31
CNOT2-239ENST00000552483 DHX36Q9H2U1 1008 aaKnown RBP13.09□□□□□ -0.31
CNOT2-239ENST00000552483 PI4KBQ9UBF8 816 aa13.09□□□□□ -0.31
CNOT2-239ENST00000552483 SLC4A4Q9Y6R1 1079 aa13.09□□□□□ -0.31
CNOT2-239ENST00000552483 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 IRF6O14896 467 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 FOXP2O15409 715 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 GDF11O95390 407 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 ZFYP08048 801 aaPredicted RBP13.08□□□□□ -0.32
CNOT2-239ENST00000552483 ERO1BQ86YB8 467 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 FAM227BQ96M60 508 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 PTPN18Q99952 460 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 RNF186Q9NXI6 227 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 CASP8AP2Q9UKL3 1982 aa13.08□□□□□ -0.32
CNOT2-239ENST00000552483 LOC285556D6RIA3 1793 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 MANSC4A6NHS7 340 aaPredicted RBP13.07□□□□□ -0.32
CNOT2-239ENST00000552483 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 CTNND1O60716 968 aaKnown RBP13.07□□□□□ -0.32
CNOT2-239ENST00000552483 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
CNOT2-239ENST00000552483 PTPRAP18433 802 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 TM4SF4P48230 202 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 GABPAQ06546 454 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 NMIQ13287 307 aaPredicted RBP13.07□□□□□ -0.32
CNOT2-239ENST00000552483 PPIL2Q13356 520 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 TTC22Q5TAA0 569 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 FOXP4Q8IVH2 680 aaPredicted RBP13.07□□□□□ -0.32
CNOT2-239ENST00000552483 SLC44A5Q8NCS7 719 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 BRI3BPQ8WY22 251 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 RILPL2Q969X0 211 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 EHD4Q9H223 541 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
CNOT2-239ENST00000552483 HERC5Q9UII4 1024 aaKnown RBP13.07□□□□□ -0.32
CNOT2-239ENST00000552483 GREB1LQ9C091 1923 aaPredicted RBP13.06□□□□□ -0.32
CNOT2-239ENST00000552483 TESPA1A2RU30 521 aaPredicted RBP13.06□□□□□ -0.32
CNOT2-239ENST00000552483 TRPA1O75762 1119 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
CNOT2-239ENST00000552483 SHMT1P34896 483 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 CAP2P40123 477 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 LBX1P52954 281 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 PPATQ06203 517 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 MOGSQ13724 837 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 CRACR2BQ8N4Y2 399 aaPredicted RBP13.06□□□□□ -0.32
CNOT2-239ENST00000552483 ATP8A2Q9NTI2 1148 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 KCNH4Q9UQ05 1017 aa13.06□□□□□ -0.32
CNOT2-239ENST00000552483 ZSWIM8A7E2V4 1837 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 CCL15-CCL14A0A0B4J2E2 113 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 USP17L12C9JPN9 530 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 USP17L21D6R901 530 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 DGKZQ13574 1117 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 CCL15Q16663 113 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 CENPQQ7L2Z9 268 aaPredicted RBP13.05□□□□□ -0.32
CNOT2-239ENST00000552483 TTC6Q86TZ1 520 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
CNOT2-239ENST00000552483 IFNL1Q8IU54 200 aa13.05□□□□□ -0.32
CNOT2-239ENST00000552483 IL25Q9H293 177 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms